|
InnateDB Gene
|
IDBG-100089.6
|
|
Last Modified
|
2014-10-13 [Report errors or provide feedback]
|
|
Gene Symbol
|
CLCA3P
|
|
Gene Name
|
chloride channel accessory 3, pseudogene
|
|
Synonyms
|
CLCA3
|
|
Species
|
Homo sapiens
|
|
Ensembl Gene
|
ENSG00000153923
|
|
Encoded Proteins
|
|
|
Protein Structure
|
|
|
Useful resources
|
Stemformatics
EHFPI
ImmGen
|
| Summary |
This gene is a transcribed pseudogene belonging to the calcium sensitive chloride conductance protein family. To date, all members of this gene family map to the same site on chromosome 1p31-p22 and share high degrees of homology in size, sequence and predicted structure, but differ significantly in their tissue distributions. This gene contains several nonsense codons compared to other family members that render the transcript a candidate for nonsense-mediated mRNA decay (NMD). Therefore, this gene is unlikely to be protein-coding. [provided by RefSeq, Jan 2009]
|
| Type |
transcribed_unprocessed_pseudogene
|
|
Genomic Location
|
Chromosome 1:86634273-86655376
|
|
Strand
|
Forward strand
|
|
Band
|
p22.3
|
|
Transcripts
|
|
|
Number of Interactions
|
This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
|
|
|
No orthologs found for this gene |
|
SwissProt
|
|
|
TrEMBL
|
|
|
UniProt Splice Variant
|
|
|
Entrez Gene
|
9629
|
|
UniGene
|
Hs.673847
|
|
RefSeq
|
|
|
HUGO
|
HGNC:2017
|
|
OMIM
|
604337
|
|
CCDS
|
|
| HPRD |
|
|
IMGT
|
|
|
EMBL
|
|
|
GenPept
|
|
|
RNA Seq Atlas
|
9629
|
|
|
|
Version 5.4