Version 5.4
Homo sapiens Gene: LRIF1
Summary
InnateDB Gene IDBG-101007.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol LRIF1
Gene Name ligand dependent nuclear receptor interacting factor 1
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000121931
Encoded Proteins
IDBP-101009
ligand dependent nuclear receptor interacting factor 1
IDBP-593589
ligand dependent nuclear receptor interacting factor 1
IDBP-600823
ligand dependent nuclear receptor interacting factor 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 1:110947185-110964079
Strand Reverse strand
Band p13.3
Transcripts
ENST00000369763 ENSP00000358778
ENST00000494675 ENSP00000435259
ENST00000485275 ENSP00000432290
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 159 experimentally validated interaction(s) in this database.
Experimentally validated
Total 159 [view]
Protein-Protein 159 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0042974 retinoic acid receptor binding
Biological Process
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
Cellular Component
GO:0005634 nucleus
GO:0015629 actin cytoskeleton
GO:0016363 nuclear matrix
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000056260
View Gene Order
ENSBTAG00000012659
Not yet available
Cross-References
SwissProt Q5T3J3
TrEMBL
UniProt Splice Variant
Entrez Gene 55791
UniGene Hs.25245 Hs.669780
RefSeq NM_018372 XM_005271029 NM_001006945
HUGO HGNC:30299
OMIM 615354
CCDS CCDS30800 CCDS41366
HPRD 17975
IMGT
EMBL AK001826 AK002131 AL360270 AL834466 AY190122 BC008115
GenPept AAH08115 AAO43631 BAA91928 BAA92097 CAD39125 CAI17128
RNA Seq Atlas 55791

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca