Version 5.4
Homo sapiens Gene: TDRKH
Summary
InnateDB Gene IDBG-102423.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol TDRKH
Gene Name tudor and KH domain containing
Synonyms TDRD2
Species Homo sapiens
Ensembl Gene ENSG00000182134
Encoded Proteins
IDBP-102425
tudor and KH domain containing
IDBP-102427
tudor and KH domain containing
IDBP-102429
tudor and KH domain containing
IDBP-102431
tudor and KH domain containing
IDBP-102433
tudor and KH domain containing
IDBP-388622
tudor and KH domain containing
IDBP-388623
tudor and KH domain containing
IDBP-583186
tudor and KH domain containing
IDBP-592547
tudor and KH domain containing
IDBP-587347
tudor and KH domain containing
IDBP-593395
tudor and KH domain containing
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 1:151770107-151791416
Strand Reverse strand
Band q21.3
Transcripts
ENST00000368827 ENSP00000357819
ENST00000368825 ENSP00000357817
ENST00000368824 ENSP00000357815
ENST00000368823 ENSP00000357813
ENST00000368822 ENSP00000357812
ENST00000440583 ENSP00000416645
ENST00000458431 ENSP00000395718
ENST00000484421
ENST00000494725
ENST00000486986
ENST00000463553
ENST00000525790 ENSP00000437147
ENST00000526413 ENSP00000433678
ENST00000526378 ENSP00000431557
ENST00000530202 ENSP00000432452
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 4 experimentally validated interaction(s) in this database.
Experimentally validated
Total 4 [view]
Protein-Protein 3 [view]
Protein-DNA 1 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0003723 RNA binding
GO:0005515 protein binding
Biological Process
GO:0007140 male meiosis
GO:0007283 spermatogenesis
GO:0009566 fertilization
GO:0030154 cell differentiation
GO:0031047 gene silencing by RNA
GO:0034587 piRNA metabolic process
GO:0043046 DNA methylation involved in gamete generation
Cellular Component
GO:0005737 cytoplasm
GO:0005739 mitochondrion
GO:0071546 pi-body
GO:0071547 piP-body
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000041912
View Gene Order
ENSBTAG00000021594
Not yet available
Cross-References
SwissProt Q9Y2W6
TrEMBL B4DJ68 E9PKN8 Q9NYV3
UniProt Splice Variant
Entrez Gene 11022
UniGene Hs.144439 Hs.678661
RefSeq NM_001083963 NM_001083964 NM_001083965 NM_006862 XM_005244854
HUGO HGNC:11713
OMIM 609501
CCDS CCDS41394 CCDS41395
HPRD 15485
IMGT
EMBL AF119121 AF227192 AF227634 AK295948 AL589765 BC022467 CH471121
GenPept AAD30971 AAF36701 AAF68379 BAG58730 CAI17175 CAI17177 EAW53409 EAW53410 EAW53411
RNA Seq Atlas 11022

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca