Version 5.4
Mus musculus Gene: Naa38
Summary
InnateDB Gene IDBG-129374.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Naa38
Gene Name N(alpha)-acetyltransferase 38, NatC auxiliary subunit
Synonyms 2010003I05Rik; AW214405; Naa38
Species Mus musculus
Ensembl Gene ENSMUSG00000044155
Encoded Proteins
IDBP-129376
N(alpha)-acetyltransferase 38, NatC auxiliary subunit
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000128534:
This gene encodes a member of the like-Sm family of proteins. The encoded protein consists of a closed barrel shape, made up of five anti-parallel beta strands and an alpha helix. This protein partners with six paralogs to form a heteroheptameric ring which transiently binds U6 small nuclear RNAs and is involved in the general maturation of RNA in the nucleus. [provided by RefSeq, Jan 2010]
Gene Information
Type Protein coding
Genomic Location Chromosome 6:18848579-18855751
Strand Forward strand
Band A2
Transcripts
ENSMUST00000056398 ENSMUSP00000057238
ENSMUST00000136982
ENSMUST00000128526
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 5 experimentally validated interaction(s) in this database.
They are also associated with 49 interaction(s) predicted by orthology.
Experimentally validated
Total 5 [view]
Protein-Protein 5 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 49 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003723 RNA binding
GO:0005515 protein binding
GO:0044822 poly(A) RNA binding
Biological Process
GO:0006397 mRNA processing
GO:0008150 biological_process
GO:0008380 RNA splicing
Cellular Component
GO:0005575 cellular_component
GO:0005681 spliceosomal complex
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000128534
View Gene Order
ENSBTAG00000012649
Not yet available
Pathways
NETPATH
REACTOME
KEGG
mmu03018
RNA degradation pathway
mmu03040
Spliceosome pathway
INOH
PID NCI
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
KEGG
hsa03018
RNA degradation pathway
hsa03040
Spliceosome pathway
INOH
PID NCI
Cross-References
SwissProt Q6ZWM4
TrEMBL
UniProt Splice Variant
Entrez Gene 76522
UniGene Mm.275158 Mm.399734 Mm.417323
RefSeq NM_133939
OMIM
CCDS CCDS39433
HPRD
IMGT
MGI ID MGI:1923772
MGI Symbol Lsm8
EMBL AK088664 AK167674 BC019458
GenPept AAH19458 BAC40488 BAE39723
RNA Seq Atlas 76522

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca