Version 5.4
Mus musculus Gene: Snd1
Summary
InnateDB Gene IDBG-130649.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Snd1
Gene Name staphylococcal nuclease and tudor domain containing 1
Synonyms AL033314; Tudor-SN
Species Mus musculus
Ensembl Gene ENSMUSG00000001424
Encoded Proteins
IDBP-130651
staphylococcal nuclease and tudor domain containing 1
IDBP-624591
staphylococcal nuclease and tudor domain containing 1
IDBP-624595
staphylococcal nuclease and tudor domain containing 1
IDBP-624612
staphylococcal nuclease and tudor domain containing 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000197157:
Gene Information
Type Protein coding
Genomic Location Chromosome 6:28475139-28935162
Strand Forward strand
Band A3.3
Transcripts
ENSMUST00000001460 ENSMUSP00000001460
ENSMUST00000168362 ENSMUSP00000126382
ENSMUST00000164915 ENSMUSP00000127317
ENSMUST00000167201 ENSMUSP00000128737
ENSMUST00000171532
ENSMUST00000163772
ENSMUST00000169321
ENSMUST00000171195
ENSMUST00000169579
ENSMUST00000166136
ENSMUST00000165151
ENSMUST00000183161
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 23 experimentally validated interaction(s) in this database.
They are also associated with 51 interaction(s) predicted by orthology.
Experimentally validated
Total 23 [view]
Protein-Protein 23 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 51 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003676 nucleic acid binding
GO:0004518 nuclease activity
GO:0005515 protein binding
GO:0016788 hydrolase activity, acting on ester bonds
GO:0044822 poly(A) RNA binding
Biological Process
GO:0001649 osteoblast differentiation
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
GO:0031047 gene silencing by RNA
GO:0090305 nucleic acid phosphodiester bond hydrolysis
Cellular Component
GO:0005634 nucleus
GO:0005737 cytoplasm
GO:0005739 mitochondrion
GO:0016020 membrane
GO:0016442 RISC complex
GO:0042470 melanosome
GO:0070062 extracellular vesicular exosome
GO:0097433 dense body
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000197157
View Gene Order
ENSBTAG00000010692
Not yet available
Pathway Predictions based on Human Orthology Data
NETPATH
NetPath_16
IL4 pathway
REACTOME
KEGG
INOH
PID NCI
cmyb_pathway
C-MYB transcription factor network
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.439987
RefSeq NM_019776 XM_006505142
OMIM
CCDS CCDS19953
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca