Version 5.4
Mus musculus Gene: Hist1h1c
Summary
InnateDB Gene IDBG-136907.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Hist1h1c
Gene Name histone cluster 1, H1c
Synonyms 0610008C09Rik; H1.2; H1c; H1f2; H1var1; His1a
Species Mus musculus
Ensembl Gene ENSMUSG00000036181
Encoded Proteins
IDBP-136909
histone cluster 1, H1c
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Histones are basic nuclear proteins responsible for nucleosome structure of the chromosomal fiber in eukaryotes. Two molecules of each of the four core histones (H2A, H2B, H3, and H4) form an octamer, around which approximately 146 bp of DNA is wrapped in repeating units, called nucleosomes. The linker histone, H1, interacts with linker DNA between nucleosomes and functions in the compaction of chromatin into higher order structures. This gene is intronless and encodes a member of the histone H1 family. Transcripts from this gene lack polyA tails but instead contain a palindromic termination element. [provided by RefSeq, Feb 2014]
Gene Information
Type Protein coding
Genomic Location Chromosome 13:23738808-23740367
Strand Forward strand
Band A3.1
Transcripts
ENSMUST00000040914 ENSMUSP00000045816
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 16 experimentally validated interaction(s) in this database.
Experimentally validated
Total 16 [view]
Protein-Protein 16 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0003677 DNA binding
GO:0005515 protein binding
GO:0031490 chromatin DNA binding
GO:0044822 poly(A) RNA binding
Biological Process
GO:0006334 nucleosome assembly
GO:0016584 nucleosome positioning
Cellular Component
GO:0000786 nucleosome
GO:0005634 nucleus
GO:0005719 nuclear euchromatin
Orthologs
No orthologs found for this gene
Cross-References
SwissProt P15864
TrEMBL Q3UXH2 Q5SZA3
UniProt Splice Variant
Entrez Gene 50708
UniGene Mm.193539
RefSeq NM_015786
OMIM
CCDS CCDS26361
HPRD
IMGT
MGI ID MGI:1931526
MGI Symbol Hist1h1c
EMBL AK135614 AK155502 AY158905 BC089604 CH466561 J03482 M25365 Y12291
GenPept AAA37807 AAA37808 AAH89604 AAO06216 BAE22591 BAE33296 CAA72970 EDL32541
RNA Seq Atlas 50708

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca