Version 5.4
Mus musculus Gene: Rdh13
Summary
InnateDB Gene IDBG-137760.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Rdh13
Gene Name retinol dehydrogenase 13 (all-trans and 9-cis)
Synonyms 8430425D21Rik
Species Mus musculus
Ensembl Gene ENSMUSG00000008435
Encoded Proteins
IDBP-137762
retinol dehydrogenase 13 (all-trans and 9-cis)
IDBP-401644
retinol dehydrogenase 13 (all-trans and 9-cis)
IDBP-538327
retinol dehydrogenase 13 (all-trans and 9-cis)
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000160439:
This gene encodes a mitochondrial short-chain dehydrogenase/reductase, which catalyzes the reduction and oxidation of retinoids. The encoded enzyme may function in retinoic acid production and may also protect the mitochondria against oxidative stress. Alternatively spliced transcript variants have been described. [provided by RefSeq, Mar 2009]
Gene Information
Type Protein coding
Genomic Location Chromosome 7:4424770-4445649
Strand Reverse strand
Band A1
Transcripts
ENSMUST00000008579 ENSMUSP00000008579
ENSMUST00000119485 ENSMUSP00000113433
ENSMUST00000138798 ENSMUSP00000114390
ENSMUST00000147599
ENSMUST00000128299
ENSMUST00000154033
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 4 interaction(s) predicted by orthology.
Predicted by orthology
Total 4 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003824 catalytic activity
GO:0016491 oxidoreductase activity
GO:0050662 coenzyme binding
Biological Process
GO:0008152 metabolic process
GO:0009644 response to high light intensity
GO:0010842 retina layer formation
GO:0042462 eye photoreceptor cell development
GO:0044237 cellular metabolic process
GO:0055114 oxidation-reduction process
Cellular Component
GO:0005739 mitochondrion
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000160439
View Gene Order
ENSBTAG00000030393
Not yet available
Cross-References
SwissProt Q8CEE7
TrEMBL
UniProt Splice Variant
Entrez Gene 108841
UniGene Mm.382933 Mm.413106 Mm.478673
RefSeq NM_001290411 NM_175372 XM_006539461 NM_001290409 XM_006539462
OMIM
CCDS CCDS20735 CCDS71877
HPRD
IMGT
MGI ID MGI:1918732
MGI Symbol Rdh13
EMBL AK028434 AK034180 BC082583
GenPept AAH82583 BAC25950 BAC28618
RNA Seq Atlas 108841

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca