Version 5.4
| Mus musculus Gene: Col27a1 | |||||||||||||||
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| Summary | |||||||||||||||
| InnateDB Gene | IDBG-154352.6 | ||||||||||||||
| Last Modified | 2014-10-13 [Report errors or provide feedback] | ||||||||||||||
| Gene Symbol | Col27a1 | ||||||||||||||
| Gene Name | collagen, type XXVII, alpha 1 | ||||||||||||||
| Synonyms | |||||||||||||||
| Species | Mus musculus | ||||||||||||||
| Ensembl Gene | ENSMUSG00000045672 | ||||||||||||||
| Encoded Proteins |
collagen, type XXVII, alpha 1
collagen, type XXVII, alpha 1
collagen, type XXVII, alpha 1
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| Protein Structure |
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| Useful resources | Stemformatics EHFPI ImmGen | ||||||||||||||
| Entrez Gene | |||||||||||||||
| Summary |
This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000196739:
Fibrillar collagens, such as COL27A1, compose one of the most ancient families of extracellular matrix molecules. They form major structural elements in extracellular matrices of cartilage, skin, and tendon (Boot-Handford et al., 2003 [PubMed 12766169]).[supplied by OMIM, Mar 2008] |
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| Gene Information | |||||||||||||||
| Type | Protein coding | ||||||||||||||
| Genomic Location | Chromosome 4:63214004-63334991 | ||||||||||||||
| Strand | Forward strand | ||||||||||||||
| Band | B3 | ||||||||||||||
| Transcripts |
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| Interactions | |||||||||||||||
| Number of Interactions |
This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
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| Gene Ontology | |||||||||||||||
Molecular Function |
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| Biological Process |
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| Cellular Component |
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| Orthologs | |||||||||||||||
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Species
Homo sapiens
Bos taurus
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Gene ID
Gene Order
Not yet available
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| Pathways | |||||||||||||||
| NETPATH | |||||||||||||||
| REACTOME |
Collagen formation pathway
Assembly of collagen fibrils and other multimeric structures pathway
Collagen biosynthesis and modifying enzymes pathway
Extracellular matrix organization pathway
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| KEGG |
ECM-receptor interaction pathway
Focal adhesion pathway
Amoebiasis pathway
Protein digestion and absorption pathway
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| INOH | |||||||||||||||
| PID NCI | |||||||||||||||
| Pathway Predictions based on Human Orthology Data | |||||||||||||||
| NETPATH | |||||||||||||||
| REACTOME |
Assembly of collagen fibrils and other multimeric structures pathway
Collagen biosynthesis and modifying enzymes pathway
Extracellular matrix organization pathway
Collagen formation pathway
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| KEGG |
ECM-receptor interaction pathway
Focal adhesion pathway
Amoebiasis pathway
Protein digestion and absorption pathway
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| INOH | |||||||||||||||
| PID NCI | |||||||||||||||
| Cross-References | |||||||||||||||
| SwissProt | Q5QNQ9 | ||||||||||||||
| TrEMBL | |||||||||||||||
| UniProt Splice Variant | |||||||||||||||
| Entrez Gene | 373864 | ||||||||||||||
| UniGene | Mm.194116 | ||||||||||||||
| RefSeq | NM_025685 XM_006538035 XM_006538036 XM_006538037 XM_006538038 XM_006538039 XM_006538040 | ||||||||||||||
| OMIM | |||||||||||||||
| CCDS | CCDS18250 | ||||||||||||||
| HPRD | |||||||||||||||
| IMGT | |||||||||||||||
| MGI ID | MGI:2672118 | ||||||||||||||
| MGI Symbol | Col27a1 | ||||||||||||||
| EMBL | AK173283 AL683828 AL691496 AY167568 | ||||||||||||||
| GenPept | AAN87341 BAD32561 CAI25268 CAI25993 | ||||||||||||||
| RNA Seq Atlas | 373864 | ||||||||||||||