Version 5.4
Mus musculus Gene: Tgoln1
Summary
InnateDB Gene IDBG-157902.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Tgoln1
Gene Name trans-golgi network protein
Synonyms AU015504; D6Ertd384e; TGN38; TGN38A; TGN38B; TGN41; TGN46; Ttgn1; Ttgn2
Species Mus musculus
Ensembl Gene ENSMUSG00000056429
Encoded Proteins
IDBP-157904
trans-golgi network protein
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000152291:
This gene encodes a type I integral membrane protein that is localized to the trans-Golgi network, a major sorting station for secretory and membrane proteins. The encoded protein cycles between early endosomes and the trans-Golgi network, and may play a role in exocytic vesicle formation. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene. [provided by RefSeq, Oct 2011]
Gene Information
Type Protein coding
Genomic Location Chromosome 6:72608432-72617000
Strand Reverse strand
Band C1
Transcripts
ENSMUST00000070524 ENSMUSP00000068487
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
They are also associated with 17 interaction(s) predicted by orthology.
Experimentally validated
Total 1 [view]
Protein-Protein 1 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 17 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
Biological Process
Cellular Component
GO:0005634 nucleus
GO:0005794 Golgi apparatus
GO:0005802 trans-Golgi network
GO:0005886 plasma membrane
GO:0016021 integral component of membrane
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000152291
View Gene Order
ENSBTAG00000038116
Not yet available
Pathways
NETPATH
REACTOME
REACT_209837
Membrane Trafficking pathway
REACT_232671
Golgi Associated Vesicle Biogenesis pathway
REACT_243409
trans-Golgi Network Vesicle Budding pathway
REACT_234979
Clathrin derived vesicle budding pathway
KEGG
INOH
PID NCI
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
REACT_19400
Golgi Associated Vesicle Biogenesis pathway
REACT_19187
Clathrin derived vesicle budding pathway
REACT_11235
trans-Golgi Network Vesicle Budding pathway
REACT_11123
Membrane Trafficking pathway
KEGG
INOH
PID NCI
Cross-References
SwissProt Q62313
TrEMBL Q4FJY3
UniProt Splice Variant
Entrez Gene 22135
UniGene Mm.246563 Mm.467046 Mm.467667
RefSeq NM_009443
OMIM
CCDS CCDS51811
HPRD
IMGT
MGI ID MGI:105080
MGI Symbol Tgoln1
EMBL AK041302 AK076586 AK133559 AK161242 AK162574 BC009143 BC141218 BC145542 CH466523 CT010269 D50031
GenPept AAH09143 AAI41219 AAI45543 BAA08757 BAC30896 BAC36404 BAE21726 BAE36262 BAE36972 CAJ18477 EDK98990
RNA Seq Atlas 22134 22135

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca