Version 5.4
Mus musculus Gene: Gatad2a
Summary
InnateDB Gene IDBG-161054.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Gatad2a
Gene Name GATA zinc finger domain containing 2A
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000036180
Encoded Proteins
IDBP-161056
GATA zinc finger domain containing 2A
IDBP-274069
GATA zinc finger domain containing 2A
IDBP-716066
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000167491:
Gene Information
Type Protein coding
Genomic Location Chromosome 8:69907069-69996379
Strand Reverse strand
Band B3.3
Transcripts
ENSMUST00000065169 ENSMUSP00000070229
ENSMUST00000116463 ENSMUSP00000112164
ENSMUST00000177851 ENSMUSP00000137386
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 14 experimentally validated interaction(s) in this database.
They are also associated with 16 interaction(s) predicted by orthology.
Experimentally validated
Total 14 [view]
Protein-Protein 14 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 16 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0030674 protein binding, bridging
GO:0046872 metal ion binding
Biological Process
GO:0001568 blood vessel development
GO:0001701 in utero embryonic development
GO:0001842 neural fold formation
GO:0006351 transcription, DNA-templated
GO:0010172 embryonic body morphogenesis
GO:0012501 programmed cell death
GO:0021506 anterior neuropore closure
GO:0045892 negative regulation of transcription, DNA-templated
Cellular Component
GO:0005634 nucleus
GO:0016581 NuRD complex
GO:0016607 nuclear speck
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000167491
View Gene Order
ENSBTAG00000003034
Not yet available
Pathways
NETPATH
REACTOME
REACT_245058
RNA Polymerase I Transcription pathway
REACT_244415
RNA Polymerase I, RNA Polymerase III, and Mitochondrial Transcription pathway
REACT_218274
Chromatin organization pathway
REACT_202766
Chromatin modifying enzymes pathway
REACT_233572
Gene Expression pathway
REACT_257106
HDACs deacetylate histones pathway
REACT_240511
RNA Polymerase I Promoter Clearance pathway
REACT_235780
RNA Polymerase I Transcription Initiation pathway
KEGG
INOH
PID NCI
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
REACT_953
RNA Polymerase I Transcription Initiation pathway
REACT_1309
RNA Polymerase I Transcription pathway
REACT_1974
RNA Polymerase I Promoter Clearance pathway
REACT_228222
HDACs deacetylate histones pathway
REACT_172623
Chromatin organization pathway
REACT_172633
Chromatin modifying enzymes pathway
REACT_21352
RNA Polymerase I, RNA Polymerase III, and Mitochondrial Transcription pathway
REACT_71
Gene Expression pathway
KEGG
INOH
PID NCI
hdac_classi_pathway
Signaling events mediated by HDAC Class I
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.270044 Mm.394128
RefSeq NM_001113345 NM_001113346 NM_145596 XM_006509631 XM_006509632 XM_006509634 XM_006509635 XM_006509636 XM_006509637
OMIM
CCDS CCDS22355 CCDS52567
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca