Version 5.4
Mus musculus Gene: Rc3h2
Summary
InnateDB Gene IDBG-165768.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Rc3h2
Gene Name ring finger and CCCH-type zinc finger domains 2
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000075376
Encoded Proteins
IDBP-165770
ring finger and CCCH-type zinc finger domains 2
IDBP-254932
ring finger and CCCH-type zinc finger domains 2
IDBP-254934
ring finger and CCCH-type zinc finger domains 2
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000056586:
Gene Information
Type Protein coding
Genomic Location Chromosome 2:37370069-37422903
Strand Reverse strand
Band B
Transcripts
ENSMUST00000100143 ENSMUSP00000097721
ENSMUST00000112936 ENSMUSP00000108558
ENSMUST00000112934 ENSMUSP00000108556
ENSMUST00000125619
ENSMUST00000143826
ENSMUST00000124218
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 2 experimentally validated interaction(s) in this database.
They are also associated with 4 interaction(s) predicted by orthology.
Experimentally validated
Total 2 [view]
Protein-Protein 2 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 4 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003677 DNA binding
GO:0003729 mRNA binding
GO:0004842 ubiquitin-protein transferase activity
GO:0005515 protein binding
GO:0008270 zinc ion binding
GO:0044822 poly(A) RNA binding
GO:0046872 metal ion binding
Biological Process
GO:0000209 protein polyubiquitination
GO:0001782 B cell homeostasis
GO:0009791 post-embryonic development
GO:0010468 regulation of gene expression
GO:0010608 posttranscriptional regulation of gene expression
GO:0035264 multicellular organism growth
GO:0042098 T cell proliferation
GO:0043029 T cell homeostasis
GO:0048286 lung alveolus development
GO:0048535 lymph node development
GO:0048536 spleen development
GO:0060173 limb development
GO:0061470 T follicular helper cell differentiation
GO:1901224 positive regulation of NIK/NF-kappaB signaling
Cellular Component
GO:0000932 cytoplasmic mRNA processing body
GO:0005634 nucleus
GO:0005737 cytoplasm
GO:0009986 cell surface
GO:0016020 membrane
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000056586
View Gene Order
ENSBTAG00000023867
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.288785 Mm.409991
RefSeq NM_001100591 NM_001290642 XM_006498124 XM_006498125
OMIM
CCDS CCDS38116 CCDS71046
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca