Version 5.4
Mus musculus Gene: Rbm47
Summary
InnateDB Gene IDBG-167144.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Rbm47
Gene Name RNA binding motif protein 47
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000070780
Encoded Proteins
IDBP-167146
RNA binding motif protein 47
IDBP-167148
RNA binding motif protein 47
IDBP-253268
RNA binding motif protein 47
IDBP-253270
RNA binding motif protein 47
IDBP-253272
RNA binding motif protein 47
IDBP-538223
RNA binding motif protein 47
IDBP-535660
RNA binding motif protein 47
IDBP-538199
RNA binding motif protein 47
IDBP-628262
RNA binding motif protein 47
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000163694:
Gene Information
Type Protein coding
Genomic Location Chromosome 5:66016549-66173117
Strand Reverse strand
Band C3.1
Transcripts
ENSMUST00000094757 ENSMUSP00000092349
ENSMUST00000094756 ENSMUSP00000092348
ENSMUST00000113726 ENSMUSP00000109355
ENSMUST00000113725 ENSMUSP00000109354
ENSMUST00000113724 ENSMUSP00000109353
ENSMUST00000132606
ENSMUST00000145625 ENSMUSP00000123167
ENSMUST00000127275 ENSMUSP00000117283
ENSMUST00000131838 ENSMUSP00000116776
ENSMUST00000122855
ENSMUST00000136402
ENSMUST00000167950 ENSMUSP00000128016
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 5 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Experimentally validated
Total 5 [view]
Protein-Protein 5 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0000166 nucleotide binding
GO:0003676 nucleic acid binding
GO:0003723 RNA binding
GO:0044822 poly(A) RNA binding
Biological Process
GO:0002244 hematopoietic progenitor cell differentiation
Cellular Component
GO:0005575 cellular_component
GO:0005634 nucleus
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000163694
View Gene Order
ENSBTAG00000002356
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.36863 Mm.394939 Mm.400185 Mm.415372 Mm.426431
RefSeq NM_001127382 NM_001291226 NM_139065 NM_178446 XM_006503956 XM_006503957 XM_006503958 XM_006503959 XM_006503960 XM_006503961 XM_006503962 XM_006503963
OMIM
CCDS CCDS19313 CCDS71598
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca