Mus musculus Gene: Snupn | |||||||||||
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Summary | |||||||||||
InnateDB Gene | IDBG-169016.6 | ||||||||||
Last Modified | 2014-10-13 [Report errors or provide feedback] | ||||||||||
Gene Symbol | Snupn | ||||||||||
Gene Name | snurportin 1 | ||||||||||
Synonyms | 0610031A09Rik; Rnut1; Snupn1 | ||||||||||
Species | Mus musculus | ||||||||||
Ensembl Gene | ENSMUSG00000055334 | ||||||||||
Encoded Proteins |
snurportin 1
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Protein Structure | |||||||||||
Useful resources | Stemformatics EHFPI ImmGen | ||||||||||
Entrez Gene | |||||||||||
Summary |
This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000169371:
The nuclear import of the spliceosomal snRNPs U1, U2, U4 and U5, is dependent on the presence of a complex nuclear localization signal. The latter is composed of the 5'-2,2,7-terminal trimethylguanosine (m3G) cap structure of the U snRNA and the Sm core domain. The protein encoded by this gene interacts specifically with m3G-cap and functions as an snRNP-specific nuclear import receptor. Alternatively spliced transcript variants encoding the same protein have been identified for this gene. [provided by RefSeq, Jul 2008] The nuclear import of the spliceosomal snRNPs U1, U2, U4 and U5, is dependent on the presence of a complex nuclear localization signal. The latter is composed of the 5\'-2,2,7-terminal trimethylguanosine (m3G) cap structure of the U snRNA and the Sm core domain. The protein encoded by this gene interacts specifically with m3G-cap and functions as an snRNP-specific nuclear import receptor. Alternatively spliced transcript variants encoding the same protein have been identified for this gene. [provided by RefSeq, Jul 2008] |
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Gene Information | |||||||||||
Type | Protein coding | ||||||||||
Genomic Location | Chromosome 9:56950878-56983206 | ||||||||||
Strand | Forward strand | ||||||||||
Band | B | ||||||||||
Transcripts |
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Interactions | |||||||||||
Number of Interactions |
This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 17 interaction(s) predicted by orthology.
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Gene Ontology | |||||||||||
Molecular Function |
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Biological Process |
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Cellular Component |
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Orthologs | |||||||||||
Species
Homo sapiens
Bos taurus
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Gene ID
Gene Order
Not yet available
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Pathways | |||||||||||
NETPATH | |||||||||||
REACTOME |
Metabolism of non-coding RNA pathway
snRNP Assembly pathway
Gene Expression pathway
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KEGG |
RNA transport pathway
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INOH | |||||||||||
PID NCI | |||||||||||
Pathway Predictions based on Human Orthology Data | |||||||||||
NETPATH | |||||||||||
REACTOME |
snRNP Assembly pathway
Metabolism of non-coding RNA pathway
Gene Expression pathway
Gene Expression pathway
Metabolism of non-coding RNA pathway
snRNP Assembly pathway
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KEGG |
RNA transport pathway
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INOH | |||||||||||
PID NCI | |||||||||||
Cross-References | |||||||||||
SwissProt | Q80W37 | ||||||||||
TrEMBL | |||||||||||
UniProt Splice Variant | |||||||||||
Entrez Gene | 66069 | ||||||||||
UniGene | Mm.409182 | ||||||||||
RefSeq | NM_178374 XM_006511336 | ||||||||||
OMIM | |||||||||||
CCDS | CCDS23214 | ||||||||||
HPRD | |||||||||||
IMGT | |||||||||||
MGI ID | MGI:1913319 | ||||||||||
MGI Symbol | Snupn | ||||||||||
EMBL | AK155315 BC049638 BC061258 | ||||||||||
GenPept | AAH49638 AAH61258 BAE33185 | ||||||||||
RNA Seq Atlas | 66069 | ||||||||||