Version 5.4
Mus musculus Gene: Cirbp
Summary
InnateDB Gene IDBG-173083.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Cirbp
Gene Name cold inducible RNA binding protein
Synonyms Cirp; R74941
Species Mus musculus
Ensembl Gene ENSMUSG00000045193
Encoded Proteins
IDBP-173085
cold inducible RNA binding protein
IDBP-271031
cold inducible RNA binding protein
IDBP-539973
cold inducible RNA binding protein
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000099622:
Gene Information
Type Protein coding
Genomic Location Chromosome 10:80165985-80172786
Strand Forward strand
Band C1
Transcripts
ENSMUST00000054666 ENSMUSP00000052642
ENSMUST00000105365 ENSMUSP00000101004
ENSMUST00000154726 ENSMUSP00000121214
ENSMUST00000139935
ENSMUST00000140774
ENSMUST00000151321
ENSMUST00000147190
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 6 experimentally validated interaction(s) in this database.
They are also associated with 41 interaction(s) predicted by orthology.
Experimentally validated
Total 6 [view]
Protein-Protein 6 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 41 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0000166 nucleotide binding
GO:0003676 nucleic acid binding
GO:0003730 mRNA 3'-UTR binding
GO:0030371 translation repressor activity
GO:0070181 SSU rRNA binding
Biological Process
GO:0009409 response to cold
GO:0009411 response to UV
GO:0017148 negative regulation of translation
GO:0034063 stress granule assembly
GO:0045727 positive regulation of translation
GO:0048255 mRNA stabilization
Cellular Component
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005737 cytoplasm
GO:0010494 cytoplasmic stress granule
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000099622
View Gene Order
ENSBTAG00000007480
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.17898 Mm.408419 Mm.487902
RefSeq NM_007705
OMIM
CCDS CCDS35975
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca