Version 5.4
Mus musculus Gene: Snapc5
Summary
InnateDB Gene IDBG-176064.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Snapc5
Gene Name small nuclear RNA activating complex, polypeptide 5
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000032398
Encoded Proteins
IDBP-176066
small nuclear RNA activating complex, polypeptide 5
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000174446:
Gene Information
Type Protein coding
Genomic Location Chromosome 9:64179297-64182684
Strand Forward strand
Band C
Transcripts
ENSMUST00000034965 ENSMUSP00000034965
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 2 experimentally validated interaction(s) in this database.
They are also associated with 7 interaction(s) predicted by orthology.
Experimentally validated
Total 2 [view]
Protein-Protein 2 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 7 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003674 molecular_function
GO:0003700 sequence-specific DNA binding transcription factor activity
Biological Process
GO:0006355 regulation of transcription, DNA-templated
GO:0006366 transcription from RNA polymerase II promoter
GO:0006384 transcription initiation from RNA polymerase III promoter
GO:0008150 biological_process
Cellular Component
GO:0005634 nucleus
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000174446
View Gene Order
ENSBTAG00000005210
Not yet available
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
REACT_22339
RNA Polymerase III Abortive And Retractive Initiation pathway
REACT_571
RNA Polymerase III Transcription Initiation From Type 3 Promoter pathway
REACT_281
RNA Polymerase III Transcription Initiation pathway
REACT_1371
RNA Polymerase III Transcription pathway
REACT_21352
RNA Polymerase I, RNA Polymerase III, and Mitochondrial Transcription pathway
REACT_71
Gene Expression pathway
REACT_216178
RNA Polymerase III Transcription pathway
REACT_203707
RNA Polymerase I, RNA Polymerase III, and Mitochondrial Transcription pathway
REACT_226022
Gene Expression pathway
REACT_212144
RNA Polymerase III Transcription Initiation pathway
REACT_209748
RNA Polymerase III Abortive And Retractive Initiation pathway
REACT_221998
RNA Polymerase III Transcription Initiation From Type 3 Promoter pathway
KEGG
INOH
PID NCI
Cross-References
SwissProt
TrEMBL E9QPK5
UniProt Splice Variant
Entrez Gene 330959
UniGene
RefSeq NM_183316
OMIM
CCDS CCDS23276
HPRD
IMGT
MGI ID MGI:1914282
MGI Symbol Snapc5
EMBL AC160118
GenPept
RNA Seq Atlas 330959

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca