Version 5.4
Mus musculus Gene: Plxnd1
Summary
InnateDB Gene IDBG-179964.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Plxnd1
Gene Name plexin D1
Synonyms 6230425C21Rik; b2b1863Clo; b2b553Clo
Species Mus musculus
Ensembl Gene ENSMUSG00000030123
Encoded Proteins
IDBP-179968
plexin D1
IDBP-539828
plexin D1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000004399:
Gene Information
Type Protein coding
Genomic Location Chromosome 6:115954811-115995005
Strand Reverse strand
Band E3
Transcripts
ENSMUST00000015511 ENSMUSP00000015511
ENSMUST00000123165
ENSMUST00000131590 ENSMUSP00000115650
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
They are also associated with 4 interaction(s) predicted by orthology.
Experimentally validated
Total 1 [view]
Protein-Protein 1 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 4 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0004872 receptor activity
GO:0005515 protein binding
GO:0017154 semaphorin receptor activity
GO:0019904 protein domain specific binding
Biological Process
GO:0001525 angiogenesis
GO:0001569 patterning of blood vessels
GO:0003151 outflow tract morphogenesis
GO:0007165 signal transduction
GO:0007275 multicellular organismal development
GO:0007416 synapse assembly
GO:0030334 regulation of cell migration
GO:0032092 positive regulation of protein binding
GO:0043542 endothelial cell migration
GO:0045765 regulation of angiogenesis
GO:0060666 dichotomous subdivision of terminal units involved in salivary gland branching
GO:0071526 semaphorin-plexin signaling pathway
Cellular Component
GO:0005622 intracellular
GO:0005886 plasma membrane
GO:0005887 integral component of plasma membrane
GO:0016020 membrane
GO:0030027 lamellipodium
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000004399
View Gene Order
ENSBTAG00000001814
Not yet available
Pathways
NETPATH
REACTOME
REACT_261444
Axon guidance pathway
REACT_188576
Developmental Biology pathway
REACT_263034
Semaphorin interactions pathway
REACT_231928
Other semaphorin interactions pathway
KEGG
INOH
PID NCI
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
REACT_19200
Other semaphorin interactions pathway
REACT_111045
Developmental Biology pathway
REACT_19271
Semaphorin interactions pathway
REACT_18266
Axon guidance pathway
KEGG
INOH
PID NCI
plexind1_pathway
Plexin-D1 Signaling
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.3085
RefSeq NM_026376
OMIM
CCDS CCDS20448
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca