Version 5.4
Mus musculus Gene: Vangl1
Summary
InnateDB Gene IDBG-180239.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Vangl1
Gene Name vang-like 1 (van gogh, Drosophila)
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000027860
Encoded Proteins
IDBP-180243
vang-like 1 (van gogh, Drosophila)
IDBP-542256
vang-like 1 (van gogh, Drosophila)
IDBP-536176
vang-like 1 (van gogh, Drosophila)
IDBP-536052
vang-like 1 (van gogh, Drosophila)
IDBP-537535
vang-like 1 (van gogh, Drosophila)
IDBP-626244
vang-like 1 (van gogh, Drosophila)
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000173218:
This gene encodes a member of the tretraspanin family. The encoded protein may be involved in mediating intestinal trefoil factor induced wound healing in the intestinal mucosa. Mutations in this gene are associated with neural tube defects. Alternate splicing results in multiple transcript variants. [provided by RefSeq, Feb 2010]
Gene Information
Type Protein coding
Genomic Location Chromosome 3:102156701-102204693
Strand Reverse strand
Band F2.2
Transcripts
ENSMUST00000029453 ENSMUSP00000029453
ENSMUST00000159388 ENSMUSP00000125043
ENSMUST00000161021 ENSMUSP00000125484
ENSMUST00000160226
ENSMUST00000162361
ENSMUST00000159586 ENSMUSP00000124874
ENSMUST00000161722 ENSMUSP00000124642
ENSMUST00000168312 ENSMUSP00000126254
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 8 experimentally validated interaction(s) in this database.
They are also associated with 9 interaction(s) predicted by orthology.
Experimentally validated
Total 8 [view]
Protein-Protein 8 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 9 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
Biological Process
GO:0007275 multicellular organismal development
Cellular Component
GO:0016021 integral component of membrane
GO:0016328 lateral plasma membrane
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000173218
View Gene Order
ENSBTAG00000005788
Not yet available
Pathways
NETPATH
REACTOME
KEGG
mmu04310
Wnt signaling pathway pathway
INOH
PID NCI
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
KEGG
hsa04310
Wnt signaling pathway pathway
INOH
PID NCI
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.118004
RefSeq NM_001165951 NM_177545
OMIM
CCDS CCDS17686 CCDS51024
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca