Version 5.4
Mus musculus Gene: Skiv2l2
Summary
InnateDB Gene IDBG-183091.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Skiv2l2
Gene Name superkiller viralicidic activity 2-like 2 (S. cerevisiae)
Synonyms 2610528A15Rik; mKIAA0052
Species Mus musculus
Ensembl Gene ENSMUSG00000016018
Encoded Proteins
IDBP-183093
superkiller viralicidic activity 2-like 2 (S. cerevisiae)
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000039123:
Gene Information
Type Protein coding
Genomic Location Chromosome 13:112867780-112927380
Strand Reverse strand
Band D2.2
Transcripts
ENSMUST00000022281 ENSMUSP00000022281
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 8 experimentally validated interaction(s) in this database.
They are also associated with 35 interaction(s) predicted by orthology.
Experimentally validated
Total 8 [view]
Protein-Protein 8 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 35 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003676 nucleic acid binding
GO:0004386 helicase activity
GO:0005515 protein binding
GO:0005524 ATP binding
GO:0016817 hydrolase activity, acting on acid anhydrides
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0044822 poly(A) RNA binding
Biological Process
GO:0000460 maturation of 5.8S rRNA
GO:0006397 mRNA processing
GO:0008380 RNA splicing
Cellular Component
GO:0000178 exosome (RNase complex)
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005730 nucleolus
GO:0071013 catalytic step 2 spliceosome
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000039123
View Gene Order
ENSBTAG00000010518
Not yet available
Pathways
NETPATH
REACTOME
KEGG
mmu03018
RNA degradation pathway
INOH
PID NCI
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
KEGG
hsa03018
RNA degradation pathway
INOH
PID NCI
Cross-References
SwissProt Q9CZU3
TrEMBL Q8BTX6 Q91YT4
UniProt Splice Variant
Entrez Gene 72198
UniGene
RefSeq NM_028151
OMIM
CCDS CCDS26778
HPRD
IMGT
MGI ID MGI:1919448
MGI Symbol Skiv2l2
EMBL AK012158 AK088426 BC014810 BC029230
GenPept AAH14810 AAH29230 BAB28066 BAC40348
RNA Seq Atlas 72198

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca