Version 5.4
Mus musculus Gene: Lmo7
Summary
InnateDB Gene IDBG-184442.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Lmo7
Gene Name LIM domain only 7
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000033060
Encoded Proteins
IDBP-184444
LIM domain only 7
IDBP-541901
LIM domain only 7
IDBP-536919
LIM domain only 7
IDBP-539742
LIM domain only 7
IDBP-541887
LIM domain only 7
IDBP-532594
LIM domain only 7
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000136153:
This gene encodes a protein containing a calponin homology (CH) domain, a PDZ domain, and a LIM domain, and may be involved in protein-protein interactions. Several alternatively spliced transcript variants encoding different isoforms have been found for this gene, however, the full-length nature of some variants is not known. [provided by RefSeq, Jan 2009]
Gene Information
Type Protein coding
Genomic Location Chromosome 14:101729957-101934710
Strand Forward strand
Band E2.3
Transcripts
ENSMUST00000100337 ENSMUSP00000097910
ENSMUST00000159769
ENSMUST00000159258 ENSMUSP00000125465
ENSMUST00000161668
ENSMUST00000159026 ENSMUSP00000124605
ENSMUST00000162091
ENSMUST00000159314 ENSMUSP00000124349
ENSMUST00000159948
ENSMUST00000159812
ENSMUST00000159597 ENSMUSP00000123706
ENSMUST00000159806 ENSMUSP00000124300
ENSMUST00000160876
ENSMUST00000159797
ENSMUST00000159154
ENSMUST00000159850
ENSMUST00000160038
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
They are also associated with 17 interaction(s) predicted by orthology.
Experimentally validated
Total 1 [view]
Protein-Protein 1 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 17 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0008022 protein C-terminus binding
GO:0008270 zinc ion binding
GO:0042805 actinin binding
Biological Process
GO:0016337 single organismal cell-cell adhesion
Cellular Component
GO:0005913 cell-cell adherens junction
GO:0016324 apical plasma membrane
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000136153
View Gene Order
ENSBTAG00000010693
Not yet available
Pathways
NETPATH
REACTOME
KEGG
mmu04520
Adherens junction pathway
INOH
PID NCI
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
KEGG
hsa04520
Adherens junction pathway
INOH
PID NCI
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.411980 Mm.486662
RefSeq NM_201529 XM_006519187 XM_006519191
OMIM
CCDS CCDS37001
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca