Version 5.4
Homo sapiens Gene: GABARAPL1
Summary
InnateDB Gene IDBG-18678.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol GABARAPL1
Gene Name GABA(A) receptor-associated protein like 1
Synonyms APG8-LIKE; APG8L; ATG8; ATG8B; ATG8L; GEC1
Species Homo sapiens
Ensembl Gene ENSG00000139112
Encoded Proteins
IDBP-18680
GABA(A) receptor-associated protein like 1
IDBP-367140
GABA(A) receptor-associated protein like 1
IDBP-603820
GABA(A) receptor-associated protein like 1
IDBP-593165
GABA(A) receptor-associated protein like 1
IDBP-587461
GABA(A) receptor-associated protein like 1
IDBP-593424
GABA(A) receptor-associated protein like 1
IDBP-588865
GABA(A) receptor-associated protein like 1
IDBP-602069
GABA(A) receptor-associated protein like 1
IDBP-586042
GABA(A) receptor-associated protein like 1
IDBP-590402
GABA(A) receptor-associated protein like 1
IDBP-588403
GABA(A) receptor-associated protein like 1
IDBP-602107
GABA(A) receptor-associated protein like 1
IDBP-599098
GABA(A) receptor-associated protein like 1
IDBP-591437
GABA(A) receptor-associated protein like 1
IDBP-591370
GABA(A) receptor-associated protein like 1
IDBP-599504
GABA(A) receptor-associated protein like 1
IDBP-588963
GABA(A) receptor-associated protein like 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 12:10212458-10223130
Strand Forward strand
Band p13.2
Transcripts
ENST00000266458 ENSP00000266458
ENST00000421801 ENSP00000411256
ENST00000539408 ENSP00000443122
ENST00000542722 ENSP00000438029
ENST00000545859 ENSP00000444108
ENST00000544284 ENSP00000439734
ENST00000545047 ENSP00000441165
ENST00000541453 ENSP00000446297
ENST00000543602 ENSP00000445857
ENST00000540424 ENSP00000443720
ENST00000537201 ENSP00000444055
ENST00000545887 ENSP00000444186
ENST00000541960 ENSP00000445709
ENST00000539289
ENST00000546017 ENSP00000446456
ENST00000535576 ENSP00000444738
ENST00000539170 ENSP00000444209
ENST00000545290 ENSP00000437451
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 92 experimentally validated interaction(s) in this database.
Experimentally validated
Total 92 [view]
Protein-Protein 91 [view]
Protein-DNA 1 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0048487 beta-tubulin binding
GO:0050811 GABA receptor binding
Biological Process
GO:0000045 autophagic vacuole assembly
GO:0006914 autophagy
Cellular Component
GO:0005622 intracellular
GO:0005737 cytoplasm
GO:0005776 autophagic vacuole
GO:0005783 endoplasmic reticulum
GO:0005794 Golgi apparatus
GO:0005874 microtubule
GO:0030659 cytoplasmic vesicle membrane
GO:0032590 dendrite membrane
GO:0032839 dendrite cytoplasm
GO:0044297 cell body
Orthologs
No orthologs found for this gene
Pathways
NETPATH
REACTOME
KEGG
hsa04140
Regulation of autophagy pathway
INOH
PID NCI
Cross-References
SwissProt
TrEMBL F5GYD9
UniProt Splice Variant
Entrez Gene 23710
UniGene Hs.524250 Hs.601191 Hs.613260 Hs.733202 Hs.739346 Hs.742789
RefSeq NM_031412 XM_005253344
HUGO HGNC:4068
OMIM 607420
CCDS CCDS8620
HPRD 07601
IMGT
EMBL AC115676
GenPept
RNA Seq Atlas 23710

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca