Version 5.4
Mus musculus Gene: Clec1a
Summary
InnateDB Gene IDBG-191992.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Clec1a
Gene Name C-type lectin domain family 1, member a
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000033082
Encoded Proteins
IDBP-191994
C-type lectin domain family 1, member a
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000150048:
This gene encodes a member of the C-type lectin/C-type lectin-like domain (CTL/CTLD) superfamily. Members of this family share a common protein fold and have diverse functions, such as cell adhesion, cell-cell signalling, glycoprotein turnover, and roles in inflammation and immune response. The encoded protein may play a role in regulating dendritic cell function. Alternative splice variants have been described but their biological nature has not been determined. This gene is closely linked to other CTL/CTLD superfamily members on chromosome 12p13 in the natural killer gene complex region. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 6:129426684-129452000
Strand Reverse strand
Band F3
Transcripts
ENSMUST00000037481 ENSMUSP00000047065
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0030246 carbohydrate binding
Biological Process
GO:0008150 biological_process
Cellular Component
GO:0005575 cellular_component
GO:0016021 integral component of membrane
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000150048
View Gene Order
ENSBTAG00000030424
Not yet available
Cross-References
SwissProt Q8BWY2
TrEMBL
UniProt Splice Variant
Entrez Gene 243653
UniGene Mm.413413
RefSeq NM_175526
OMIM
CCDS CCDS20587
HPRD
IMGT
MGI ID MGI:2444151
MGI Symbol Clec1a
EMBL AK031121 AK049608 BC052840
GenPept AAH52840 BAC27264 BAC33840
RNA Seq Atlas 243653

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca