Version 5.4
Homo sapiens Gene: SETD3
Summary
InnateDB Gene IDBG-19470.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol SETD3
Gene Name SET domain containing 3
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000183576
Encoded Proteins
IDBP-19472
SET domain containing 3
IDBP-19474
SET domain containing 3
IDBP-19476
SET domain containing 3
IDBP-377106
SET domain containing 3
IDBP-377108
SET domain containing 3
IDBP-377118
SET domain containing 3
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 14:99397746-99480879
Strand Reverse strand
Band q32.2
Transcripts
ENST00000331768 ENSP00000327436
ENST00000357563 ENSP00000350174
ENST00000329331 ENSP00000327910
ENST00000446066 ENSP00000396870
ENST00000453764 ENSP00000398966
ENST00000436070 ENSP00000408602
ENST00000453938
ENST00000489770
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 9 experimentally validated interaction(s) in this database.
Experimentally validated
Total 9 [view]
Protein-Protein 9 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0001102 RNA polymerase II activating transcription factor binding
GO:0003713 transcription coactivator activity
GO:0005515 protein binding
GO:0042800 histone methyltransferase activity (H3-K4 specific)
GO:0046975 histone methyltransferase activity (H3-K36 specific)
Biological Process
GO:0006351 transcription, DNA-templated
GO:0010452 histone H3-K36 methylation
GO:0018022 peptidyl-lysine methylation
GO:0018023 peptidyl-lysine trimethylation
GO:0018026 peptidyl-lysine monomethylation
GO:0018027 peptidyl-lysine dimethylation
GO:0045893 positive regulation of transcription, DNA-templated
GO:0045944 positive regulation of transcription from RNA polymerase II promoter
GO:0051149 positive regulation of muscle cell differentiation
GO:0051568 histone H3-K4 methylation
GO:2001141 regulation of RNA biosynthetic process
Cellular Component
GO:0000790 nuclear chromatin
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000056770
View Gene Order
ENSBTAG00000018310
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene
RefSeq NM_032233 NM_199123
HUGO
OMIM
CCDS CCDS9951 CCDS9952
HPRD 08664
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca