Mus musculus Gene: Gtf2b
Summary
InnateDB Gene IDBG-197413.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Gtf2b
Gene Name general transcription factor IIB
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000028271
Encoded Proteins
general transcription factor IIB
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000137947:
This gene encodes the general transcription factor IIB, one of the ubiquitous factors required for transcription initiation by RNA polymerase II. The protein localizes to the nucleus where it forms a complex (the DAB complex) with transcription factors IID and IIA. Transcription factor IIB serves as a bridge between IID, the factor which initially recognizes the promoter sequence, and RNA polymerase II. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 3:142765226-142783603
Strand Forward strand
Band H1
Transcripts
ENSMUST00000029938 ENSMUSP00000029938
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 12 experimentally validated interaction(s) in this database.
They are also associated with 74 interaction(s) predicted by orthology.
Experimentally validated
Total 12 [view]
Protein-Protein 9 [view]
Protein-DNA 3 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 74 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0001047 core promoter binding
GO:0003677 DNA binding
GO:0005515 protein binding
GO:0008134 transcription factor binding
GO:0008270 zinc ion binding
GO:0017025 TBP-class protein binding
GO:0046966 thyroid hormone receptor binding
Biological Process
GO:0006352 DNA-templated transcription, initiation
GO:0006355 regulation of transcription, DNA-templated
Cellular Component
GO:0005634 nucleus
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
Not yet available
Pathways
NETPATH
REACTOME
RNA Polymerase II Transcription Initiation And Promoter Clearance pathway
RNA Polymerase II Transcription Initiation pathway
RNA Polymerase II Promoter Escape pathway
RNA Polymerase II Transcription Pre-Initiation And Promoter Opening pathway
RNA Polymerase II Pre-transcription Events pathway
Gene Expression pathway
RNA Polymerase II Transcription pathway
KEGG
Basal transcription factors pathway
INOH
PID NCI
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
RNA Polymerase II Transcription Pre-Initiation And Promoter Opening pathway
RNA Polymerase II Pre-transcription Events pathway
RNA Polymerase II Promoter Escape pathway
RNA Polymerase II Transcription Initiation pathway
RNA Polymerase II Transcription Initiation And Promoter Clearance pathway
HIV Transcription Initiation pathway
RNA Polymerase II HIV Promoter Escape pathway
Transcription of the HIV genome pathway
Late Phase of HIV Life Cycle pathway
RNA Polymerase II Transcription pathway
HIV Life Cycle pathway
HIV Infection pathway
Gene Expression pathway
Disease pathway
KEGG
Basal transcription factors pathway
INOH
PID NCI
Cross-References
SwissProt P62915
TrEMBL Q3ULN2
UniProt Splice Variant
Entrez Gene 229906
UniGene Mm.271756 Mm.400423
RefSeq NM_145546
OMIM
CCDS CCDS17882
HPRD
IMGT
MGI ID MGI:2385191
MGI Symbol Gtf2b
EMBL AK133097 AK145403 AK146223 AK146666 AK146910 AK151577 BC016637 CH466532
GenPept AAH16637 BAE21509 BAE26416 BAE26991 BAE27344 BAE27522 BAE30517 EDL12044
RNA Seq Atlas 229906