Version 5.4
Mus musculus Gene: Stx6
Summary
InnateDB Gene IDBG-199713.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Stx6
Gene Name syntaxin 6
Synonyms 2310039E05Rik; 2410005I16Rik; AA437559; AI415714; AI845861
Species Mus musculus
Ensembl Gene ENSMUSG00000026470
Encoded Proteins
IDBP-199715
syntaxin 6
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000135823:
Gene Information
Type Protein coding
Genomic Location Chromosome 1:155158703-155203517
Strand Forward strand
Band G3
Transcripts
ENSMUST00000027743 ENSMUSP00000027743
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 13 experimentally validated interaction(s) in this database.
They are also associated with 19 interaction(s) predicted by orthology.
Experimentally validated
Total 13 [view]
Protein-Protein 13 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 19 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005484 SNAP receptor activity
GO:0005515 protein binding
Biological Process
GO:0006886 intracellular protein transport
GO:0006906 vesicle fusion
GO:0007032 endosome organization
GO:0016192 vesicle-mediated transport
GO:0042147 retrograde transport, endosome to Golgi
GO:0048193 Golgi vesicle transport
Cellular Component
GO:0000139 Golgi membrane
GO:0005769 early endosome
GO:0005794 Golgi apparatus
GO:0005802 trans-Golgi network
GO:0016020 membrane
GO:0016021 integral component of membrane
GO:0031201 SNARE complex
GO:0032588 trans-Golgi network membrane
GO:0048471 perinuclear region of cytoplasm
GO:0055037 recycling endosome
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000135823
View Gene Order
ENSBTAG00000020458
Not yet available
Pathways
NETPATH
REACTOME
KEGG
mmu04130
SNARE interactions in vesicular transport pathway
INOH
PID NCI
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
KEGG
hsa04130
SNARE interactions in vesicular transport pathway
INOH
PID NCI
Cross-References
SwissProt Q9JKK1
TrEMBL
UniProt Splice Variant
Entrez Gene 58244
UniGene Mm.465911
RefSeq NM_021433
OMIM
CCDS CCDS35741
HPRD
IMGT
MGI ID MGI:1926235
MGI Symbol Stx6
EMBL AF237814 AK009690 AK019106 AK031673 AK044905 AK049124 BC029205
GenPept AAF40221 AAH29205 BAB26441 BAB31549 BAC27505 BAC32135 BAC33556
RNA Seq Atlas 58244

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca