Version 5.4
Mus musculus Gene: Supt6h
Summary
InnateDB Gene IDBG-202416.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Supt6h
Gene Name suppressor of Ty 6 homolog (S. cerevisiae)
Synonyms 5131400N11Rik; AI132449; mKIAA0162; SPT6; Supt6h
Species Mus musculus
Ensembl Gene ENSMUSG00000002052
Encoded Proteins
IDBP-202418
suppressor of Ty 6 homolog (S. cerevisiae)
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000109111:
Gene Information
Type Protein coding
Genomic Location Chromosome 11:78206746-78245987
Strand Reverse strand
Band B5
Transcripts
ENSMUST00000002121 ENSMUSP00000002121
ENSMUST00000108314
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 14 experimentally validated interaction(s) in this database.
They are also associated with 18 interaction(s) predicted by orthology.
Experimentally validated
Total 14 [view]
Protein-Protein 14 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 18 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003677 DNA binding
GO:0003723 RNA binding
GO:0005515 protein binding
GO:0016788 hydrolase activity, acting on ester bonds
GO:0042393 histone binding
GO:0044822 poly(A) RNA binding
Biological Process
GO:0006139 nucleobase-containing compound metabolic process
GO:0006351 transcription, DNA-templated
GO:0006357 regulation of transcription from RNA polymerase II promoter
GO:0006397 mRNA processing
GO:0008380 RNA splicing
GO:0010793 regulation of mRNA export from nucleus
GO:0032784 regulation of DNA-templated transcription, elongation
GO:0032968 positive regulation of transcription elongation from RNA polymerase II promoter
GO:0045191 regulation of isotype switching
GO:0050684 regulation of mRNA processing
GO:0051028 mRNA transport
GO:0051147 regulation of muscle cell differentiation
GO:0061086 negative regulation of histone H3-K27 methylation
Cellular Component
GO:0005634 nucleus
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000109111
View Gene Order
ENSBTAG00000009036
Not yet available
Cross-References
SwissProt Q62383
TrEMBL Q3TY72 Q3UWU8
UniProt Splice Variant
Entrez Gene 20926
UniGene Mm.20755
RefSeq NM_009297 XM_006532743
OMIM
CCDS CCDS25095
HPRD
IMGT
MGI ID MGI:107726
MGI Symbol Supt6
EMBL AK046156 AK129069 AK136094 AK158846 AL591070 BC072657 U40375
GenPept AAB18950 AAH72657 BAC32616 BAC97879 BAE22816 BAE34691 CAI24323
RNA Seq Atlas 20926

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca