Version 5.4
Mus musculus Gene: Ubp1
Summary
InnateDB Gene IDBG-203220.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Ubp1
Gene Name upstream binding protein 1
Synonyms Cp2b; LBP-1a; LBP-1b; NF2d9
Species Mus musculus
Ensembl Gene ENSMUSG00000009741
Encoded Proteins
IDBP-203222
upstream binding protein 1
IDBP-203226
upstream binding protein 1
IDBP-273991
upstream binding protein 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000153560:
Gene Information
Type Protein coding
Genomic Location Chromosome 9:113930934-113977199
Strand Forward strand
Band F3
Transcripts
ENSMUST00000009885 ENSMUSP00000009885
ENSMUST00000084885 ENSMUSP00000081946
ENSMUST00000116492 ENSMUSP00000112192
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 9 experimentally validated interaction(s) in this database.
They are also associated with 11 interaction(s) predicted by orthology.
Experimentally validated
Total 9 [view]
Protein-Protein 8 [view]
Protein-DNA 0
Protein-RNA 1 [view]
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 11 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003677 DNA binding
Biological Process
GO:0001525 angiogenesis
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
Cellular Component
GO:0005634 nucleus
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000153560
View Gene Order
ENSBTAG00000003968
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.396708
RefSeq NM_001083319 NM_013699 XM_006512051 XM_006512054
OMIM
CCDS CCDS40788 CCDS40789
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca