Version 5.4
Mus musculus Gene: Atrn
Summary
InnateDB Gene IDBG-206748.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Atrn
Gene Name attractin
Synonyms AW558010; mahogany; mg; Mgca; mKIAA0548
Species Mus musculus
Ensembl Gene ENSMUSG00000027312
Encoded Proteins
IDBP-206750
attractin
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000088812:
Multiple transcript variants encoding different isoforms exist for this gene. One of the isoforms is a membrane-bound protein with sequence similarity to the mouse mahogany protein, a receptor involved in controlling obesity. The other two isoforms are secreted proteins involved in the initial immune cell clustering during inflammatory responses that may regulate the chemotactic activity of chemokines. [provided by RefSeq, May 2011]
Gene Information
Type Protein coding
Genomic Location Chromosome 2:130906495-131030333
Strand Forward strand
Band F1
Transcripts
ENSMUST00000028781 ENSMUSP00000028781
ENSMUST00000134964
ENSMUST00000156982
ENSMUST00000132557
ENSMUST00000151364
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
They are also associated with 3 interaction(s) predicted by orthology.
Experimentally validated
Total 1 [view]
Protein-Protein 1 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 3 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0004872 receptor activity
GO:0005515 protein binding
GO:0030246 carbohydrate binding
Biological Process
GO:0006954 inflammatory response
GO:0006979 response to oxidative stress
GO:0007275 multicellular organismal development
GO:0021549 cerebellum development
GO:0040014 regulation of multicellular organism growth
GO:0042552 myelination
GO:0043473 pigmentation
Cellular Component
GO:0005615 extracellular space
GO:0005737 cytoplasm
GO:0005886 plasma membrane
GO:0016020 membrane
GO:0016021 integral component of membrane
GO:0070062 extracellular vesicular exosome
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000088812
View Gene Order
ENSBTAG00000003848
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.119936 Mm.400989 Mm.412593
RefSeq NM_009730 XM_006498606
OMIM
CCDS CCDS16751
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca