Version 5.4
Mus musculus Gene: Ift52
Summary
InnateDB Gene IDBG-211825.7
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Ift52
Gene Name intraflagellar transport 52
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000017858
Encoded Proteins
IDBP-211827
intraflagellar transport 52 homolog (Chlamydomonas)
IDBP-535121
intraflagellar transport 52 homolog (Chlamydomonas)
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000101052:
Gene Information
Type Protein coding
Genomic Location Chromosome 2:163017354-163046141
Strand Forward strand
Band H2
Transcripts
ENSMUST00000018002 ENSMUSP00000018002
ENSMUST00000150396 ENSMUSP00000121943
ENSMUST00000125144
ENSMUST00000152201
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 3 experimentally validated interaction(s) in this database.
They are also associated with 2 interaction(s) predicted by orthology.
Experimentally validated
Total 3 [view]
Protein-Protein 3 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 2 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
Biological Process
GO:0001841 neural tube formation
GO:0001947 heart looping
GO:0007224 smoothened signaling pathway
GO:0007368 determination of left/right symmetry
GO:0009953 dorsal/ventral pattern formation
GO:0042073 intraciliary transport
GO:0042733 embryonic digit morphogenesis
GO:0050680 negative regulation of epithelial cell proliferation
GO:0060271 cilium morphogenesis
GO:0070613 regulation of protein processing
Cellular Component
GO:0005813 centrosome
GO:0005929 cilium
GO:0030992 intraciliary transport particle B
GO:0032391 photoreceptor connecting cilium
GO:0036064 ciliary basal body
GO:0044292 dendrite terminus
GO:0097542 ciliary tip
GO:0097546 ciliary base
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000101052
View Gene Order
ENSBTAG00000019606
Not yet available
Pathways
NETPATH
REACTOME
REACT_269412
Hedgehog 'off' state pathway
REACT_250064
Signaling by Hedgehog pathway
REACT_188257
Signal Transduction pathway
KEGG
INOH
PID NCI
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
REACT_228134
Signaling by Hedgehog pathway
REACT_111102
Signal Transduction pathway
REACT_267634
Hedgehog 'off' state pathway
KEGG
INOH
PID NCI
Cross-References
SwissProt Q62559
TrEMBL F6RBL8
UniProt Splice Variant
Entrez Gene 245866
UniGene Mm.34034 Mm.407016
RefSeq NM_172150 XM_006499541
OMIM
CCDS CCDS17005
HPRD
IMGT
MGI ID MGI:2387217
MGI Symbol Ift52
EMBL AK088467 AK144188 AK167194 AL591584 BC037708 L38481
GenPept AAA96241 AAH37708 BAC40371 BAE25755 BAE39324
RNA Seq Atlas 245866

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca