Version 5.4
Mus musculus Gene: Stx16
Summary
InnateDB Gene IDBG-213413.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Stx16
Gene Name syntaxin 16
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000027522
Encoded Proteins
IDBP-213415
syntaxin 16
IDBP-213419
syntaxin 16
IDBP-536618
syntaxin 16
IDBP-540511
syntaxin 16
IDBP-537661
syntaxin 16
IDBP-536040
syntaxin 16
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000124222:
This gene encodes a protein that is a member of the syntaxin or t-SNARE (target-SNAP receptor) family. These proteins are found on cell membranes and serve as the targets for V-SNARES (vesicle-SNAP receptors) permitting specific synaptic vesicle docking and fusion. A microdeletion in the region of chromosome 20 where this gene is located has been associated with pseudohypoparathyroidism type Ib. Multiple transcript variants have been found for this gene. Read-through transcription also exists between this gene and the neighboring downstream aminopeptidase-like 1 (NPEPL1) gene. [provided by RefSeq, Mar 2011]
Gene Information
Type Protein coding
Genomic Location Chromosome 2:174076308-174099771
Strand Forward strand
Band H4
Transcripts
ENSMUST00000044638 ENSMUSP00000039543
ENSMUST00000087908 ENSMUSP00000085218
ENSMUST00000155000 ENSMUSP00000119952
ENSMUST00000134876 ENSMUSP00000123275
ENSMUST00000147038 ENSMUSP00000120279
ENSMUST00000156054 ENSMUSP00000116618
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 5 experimentally validated interaction(s) in this database.
They are also associated with 4 interaction(s) predicted by orthology.
Experimentally validated
Total 5 [view]
Protein-Protein 5 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 4 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005484 SNAP receptor activity
GO:0005515 protein binding
Biological Process
GO:0006886 intracellular protein transport
GO:0006891 intra-Golgi vesicle-mediated transport
GO:0016192 vesicle-mediated transport
GO:0042147 retrograde transport, endosome to Golgi
Cellular Component
GO:0000139 Golgi membrane
GO:0005730 nucleolus
GO:0005794 Golgi apparatus
GO:0016020 membrane
GO:0016021 integral component of membrane
GO:0031201 SNARE complex
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000124222
View Gene Order
ENSBTAG00000003872
Not yet available
Pathways
NETPATH
REACTOME
KEGG
mmu04130
SNARE interactions in vesicular transport pathway
INOH
PID NCI
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
KEGG
hsa04130
SNARE interactions in vesicular transport pathway
INOH
PID NCI
Cross-References
SwissProt
TrEMBL B7ZCB8 B7ZCB9
UniProt Splice Variant
Entrez Gene 228960
UniGene Mm.399871 Mm.487977
RefSeq NM_001102423 NM_001102424 NM_001102425 NM_172675 XM_006499435 XM_006499436 XM_006499437 XM_006499438 XM_006499439 XM_006499440 XM_006499441 XM_006499442
OMIM
CCDS CCDS17147
HPRD
IMGT
MGI ID MGI:1923396
MGI Symbol Stx16
EMBL AL669896
GenPept
RNA Seq Atlas 228960

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca