Version 5.4
Homo sapiens Gene: TTC5
Summary
InnateDB Gene IDBG-2135.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol TTC5
Gene Name tetratricopeptide repeat domain 5
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000136319
Encoded Proteins
IDBP-2137
tetratricopeptide repeat domain 5
IDBP-2139
tetratricopeptide repeat domain 5
IDBP-592754
tetratricopeptide repeat domain 5
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 14:20256558-20305994
Strand Reverse strand
Band q11.2
Transcripts
ENST00000258821 ENSP00000258821
ENST00000383029 ENSP00000372496
ENST00000556592
ENST00000554992
ENST00000554157
ENST00000557379
ENST00000553828 ENSP00000451259
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 6 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Experimentally validated
Total 6 [view]
Protein-Protein 6 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003677 DNA binding
GO:0003682 chromatin binding
GO:0005515 protein binding
Biological Process
GO:0006281 DNA repair
GO:0045944 positive regulation of transcription from RNA polymerase II promoter
Cellular Component
GO:0005634 nucleus
GO:0005737 cytoplasm
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000006288
View Gene Order
ENSBTAG00000009372
Not yet available
Pathways
NETPATH
REACTOME
KEGG
INOH
PID NCI
p53regulationpathway
p53 pathway
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.729462 Hs.736904 Hs.98553
RefSeq NM_138376
HUGO
OMIM
CCDS CCDS9546
HPRD 15584
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca