Version 5.4
Homo sapiens Gene: RPRD1A
Summary
InnateDB Gene IDBG-2531.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol RPRD1A
Gene Name regulation of nuclear pre-mRNA domain containing 1A
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000141425
Encoded Proteins
IDBP-2535
regulation of nuclear pre-mRNA domain containing 1A
IDBP-231663
regulation of nuclear pre-mRNA domain containing 1A
IDBP-727531
IDBP-726766
IDBP-726397
IDBP-726384
IDBP-726258
IDBP-726199
IDBP-725572
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary P15RS is upregulated in cells overexpressing cyclin-dependent kinase inhibitor p15(INK4b) (CDKN2B; MIM 600431) and may have a role in cell cycle regulation (Liu et al., 2002 [PubMed 12470661]).[supplied by OMIM, Mar 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 18:35984387-36067576
Strand Reverse strand
Band q12.2
Transcripts
ENST00000357384 ENSP00000349955
ENST00000399022 ENSP00000381984
ENST00000592674 ENSP00000467949
ENST00000585953 ENSP00000467268
ENST00000590898 ENSP00000467991
ENST00000589050 ENSP00000468209
ENST00000588459
ENST00000588737 ENSP00000465444
ENST00000587563 ENSP00000468108
ENST00000585879 ENSP00000468173
ENST00000591994
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 23 experimentally validated interaction(s) in this database.
Experimentally validated
Total 23 [view]
Protein-Protein 23 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
Biological Process
GO:0070940 dephosphorylation of RNA polymerase II C-terminal domain
Cellular Component
GO:0016591 DNA-directed RNA polymerase II, holoenzyme
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000040446
View Gene Order
ENSBTAG00000005497
Not yet available
Cross-References
SwissProt
TrEMBL K7EQR8
UniProt Splice Variant
Entrez Gene 55197
UniGene Hs.464912 Hs.615695 Hs.645628
RefSeq NM_018170 XM_005258293 XM_005258294
HUGO HGNC:25560
OMIM 610347
CCDS CCDS11917
HPRD 10134
IMGT
EMBL AC091060
GenPept
RNA Seq Atlas 55197

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca