Version 5.4
Homo sapiens Gene: COG6
Summary
InnateDB Gene IDBG-26322.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol COG6
Gene Name component of oligomeric golgi complex 6
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000133103
Encoded Proteins
IDBP-26328
component of oligomeric golgi complex 6
IDBP-365831
component of oligomeric golgi complex 6
IDBP-365838
component of oligomeric golgi complex 6
IDBP-365840
component of oligomeric golgi complex 6
IDBP-603863
component of oligomeric golgi complex 6
IDBP-584414
component of oligomeric golgi complex 6
IDBP-585151
component of oligomeric golgi complex 6
IDBP-585651
component of oligomeric golgi complex 6
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene encodes a subunit of the conserved oligomeric Golgi complex that is required for maintaining normal structure and activity of the Golgi apparatus. The encoded protein is organized with conserved oligomeric Golgi complex components 5, 7 and 8 into a sub-complex referred to as lobe B. Alternative splicing results in multiple transcript variants.[provided by RefSeq, Feb 2009]
Gene Information
Type Protein coding
Genomic Location Chromosome 13:39655627-39791665
Strand Forward strand
Band q14.11
Transcripts
ENST00000356576 ENSP00000348983
ENST00000416691 ENSP00000403733
ENST00000455146 ENSP00000397441
ENST00000422759 ENSP00000412877
ENST00000465775
ENST00000460701
ENST00000542266 ENSP00000441297
ENST00000543790 ENSP00000440438
ENST00000543804 ENSP00000440473
ENST00000536488 ENSP00000445217
ENST00000537156
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 12 experimentally validated interaction(s) in this database.
Experimentally validated
Total 12 [view]
Protein-Protein 12 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
Biological Process
GO:0006891 intra-Golgi vesicle-mediated transport
GO:0015031 protein transport
GO:0070085 glycosylation
Cellular Component
GO:0000139 Golgi membrane
GO:0017119 Golgi transport complex
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000027742
View Gene Order
ENSBTAG00000016635
Not yet available
Cross-References
SwissProt Q9Y2V7
TrEMBL
UniProt Splice Variant
Entrez Gene 57511
UniGene Hs.507805 Hs.614467
RefSeq NM_001145079 NM_020751
HUGO HGNC:18621
OMIM 606977
CCDS CCDS45042 CCDS9370
HPRD 08445
IMGT
EMBL AB032960 AF116827 AL512505 BC051723 CH471075 CR627406
GenPept AAD29633 AAH51723 BAA86448 CAH10495 CAI16937 CAM23735 EAX08619
RNA Seq Atlas 57511

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca