InnateDB: Systems Biology of the Innate Immune Response

Homo sapiens Gene: RPS7

Summary

InnateDB Gene

IDBG-26561.6

Last Modified

2014-10-13 [Report errors or provide feedback]

Gene Symbol

RPS7

Gene Name

ribosomal protein S7

Synonyms

DBA8; S7

Species

Homo sapiens

Ensembl Gene

ENSG00000171863

Encoded Proteins

IDBP-26563

ribosomal protein S7

IDBP-292684

ribosomal protein S7

IDBP-292685

ribosomal protein S7

IDBP-292686

ribosomal protein S7

Protein Structure

Useful resources

Stemformatics EHFPI ImmGen

Entrez Gene

Summary

Ribosomes, the organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit. Together these subunits are composed of 4 RNA species and approximately 80 structurally distinct proteins. This gene encodes a ribosomal protein that is a component of the 40S subunit. The protein belongs to the S7E family of ribosomal proteins. It is located in the cytoplasm. As is typical for genes encoding ribosomal proteins, there are multiple processed pseudogenes of this gene dispersed through the genome. [provided by RefSeq, Jul 2008]

Gene Information

Type

Protein coding

Genomic Location

Chromosome 2:3575205-3580919

Strand

Forward strand

Band

p25.3

Transcripts

ENST00000304921	ENSP00000339095
ENST00000403564	ENSP00000385018
ENST00000406376	ENSP00000385286
ENST00000407445	ENSP00000385729
ENST00000462576
ENST00000491937
ENST00000481006
ENST00000479123
ENST00000472966

Interactions

Number of Interactions

This gene and/or its encoded proteins are associated with 134 experimentally validated interaction(s) in this database.
They are also associated with 2 interaction(s) predicted by orthology.

Experimentally validated
Total	134 [view]
Protein-Protein	134 [view]
Protein-DNA	0
Protein-RNA	0
DNA-DNA	0
RNA-RNA	0
DNA-RNA	0

Predicted by orthology
Total	2 [view]

Gene Ontology

Molecular Function

Accession	GO Term
GO:0003723	RNA binding
GO:0003735	structural constituent of ribosome
GO:0005515	protein binding
GO:0044822	poly(A) RNA binding

Biological Process

GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0002181	cytoplasmic translation
GO:0006364	rRNA processing
GO:0006412	translation
GO:0006413	translational initiation
GO:0006414	translational elongation
GO:0006415	translational termination
GO:0006614	SRP-dependent cotranslational protein targeting to membrane
GO:0010467	gene expression
GO:0016032	viral process
GO:0016070	RNA metabolic process
GO:0016071	mRNA metabolic process
GO:0019058	viral life cycle
GO:0019083	viral transcription
GO:0042274	ribosomal small subunit biogenesis
GO:0044267	cellular protein metabolic process

Cellular Component

GO:0005622	intracellular
GO:0005634	nucleus
GO:0005730	nucleolus
GO:0005737	cytoplasm
GO:0005815	microtubule organizing center
GO:0005829	cytosol
GO:0005840	ribosome
GO:0016020	membrane
GO:0022627	cytosolic small ribosomal subunit
GO:0030529	ribonucleoprotein complex
GO:0030686	90S preribosome
GO:0032040	small-subunit processome
GO:0070062	extracellular vesicular exosome