Version 5.4
Homo sapiens Gene: PTCD2
Summary
InnateDB Gene IDBG-27670.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol PTCD2
Gene Name pentatricopeptide repeat domain 2
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000049883
Encoded Proteins
IDBP-27672
pentatricopeptide repeat domain 2
IDBP-27674
pentatricopeptide repeat domain 2
IDBP-476068
pentatricopeptide repeat domain 2
IDBP-482512
pentatricopeptide repeat domain 2
IDBP-475514
pentatricopeptide repeat domain 2
IDBP-479980
pentatricopeptide repeat domain 2
IDBP-480460
pentatricopeptide repeat domain 2
IDBP-480660
pentatricopeptide repeat domain 2
IDBP-595584
pentatricopeptide repeat domain 2
IDBP-588176
pentatricopeptide repeat domain 2
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 5:72320367-72360225
Strand Forward strand
Band q13.2
Transcripts
ENST00000380639 ENSP00000370013
ENST00000308077 ENSP00000308948
ENST00000515198 ENSP00000427524
ENST00000511752 ENSP00000429665
ENST00000486995 ENSP00000425606
ENST00000503868 ENSP00000427349
ENST00000510676 ENSP00000426295
ENST00000503315 ENSP00000425773
ENST00000493283
ENST00000460837
ENST00000543322 ENSP00000438810
ENST00000536805 ENSP00000444772
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
Experimentally validated
Total 1 [view]
Protein-Protein 1 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0044822 poly(A) RNA binding
Biological Process
GO:0001822 kidney development
GO:0001889 liver development
GO:0006397 mRNA processing
GO:0007005 mitochondrion organization
GO:0007507 heart development
GO:0010468 regulation of gene expression
GO:0048747 muscle fiber development
GO:0050684 regulation of mRNA processing
GO:0055010 ventricular cardiac muscle tissue morphogenesis
Cellular Component
GO:0005739 mitochondrion
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000021650
View Gene Order
ENSBTAG00000014675
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.126906 Hs.710020
RefSeq NM_001284403 NM_001284404 NM_001284405 NM_024754
HUGO
OMIM
CCDS CCDS4014 CCDS68891 CCDS68892 CCDS75258
HPRD 15193
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca