Version 5.4
Homo sapiens Gene: LGALS9C
Summary
InnateDB Gene IDBG-34073.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol LGALS9C
Gene Name lectin, galactoside-binding, soluble, 9C
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000171916
Encoded Proteins
IDBP-34075
lectin, galactoside-binding, soluble, 9C
IDBP-759813
IDBP-761143
IDBP-762017
IDBP-758179
IDBP-761956
IDBP-757901
IDBP-759159
IDBP-762976
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene was initially thought to represent a pseudogene of galectin 9; however, this transcript has good exon-intron structure and encodes a predicted protein of the same size as and highly similar to galectin 9. This gene is one of two similar loci on chromosome 17p similar to galectin 9 and now thought to be protein-encoding. This gene is the more telomeric gene. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 17:18476737-18494945
Strand Forward strand
Band p11.2
Transcripts
ENST00000328114 ENSP00000329932
ENST00000579773 ENSP00000463209
ENST00000584127
ENST00000577265
ENST00000578450
ENST00000582928
ENST00000578563 ENSP00000462660
ENST00000580674 ENSP00000461967
ENST00000582333 ENSP00000464682
ENST00000584170
ENST00000583322 ENSP00000462708
ENST00000581545 ENSP00000464108
ENST00000577691 ENSP00000462967
ENST00000578983
ENST00000584941 ENSP00000462760
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
Experimentally validated
Total 1 [view]
Protein-Protein 1 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0030246 carbohydrate binding
Biological Process
Cellular Component
Orthologs
No orthologs found for this gene
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.462402
RefSeq NM_001040078 XM_005256769 XM_005256770 XM_006721895
HUGO
OMIM
CCDS CCDS32587
HPRD
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca