Version 5.4
Homo sapiens Gene: LY6G5B
Summary
InnateDB Gene IDBG-402661.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol LY6G5B
Gene Name lymphocyte antigen 6 complex, locus G5B
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000240053
Encoded Proteins
IDBP-78589
lymphocyte antigen 6 complex, locus G5B
IDBP-293090
lymphocyte antigen 6 complex, locus G5B
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary LY6G5B belongs to a cluster of leukocyte antigen-6 (LY6) genes located in the major histocompatibility complex (MHC) class III region on chromosome 6. Members of the LY6 superfamily typically contain 70 to 80 amino acids, including 8 to 10 cysteines. Most LY6 proteins are attached to the cell surface by a glycosylphosphatidylinositol (GPI) anchor that is directly involved in signal transduction (Mallya et al., 2002 [PubMed 12079290]).[supplied by OMIM, Mar 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 6:31670167-31673776
Strand Forward strand
Band p21.33
Transcripts
ENST00000375864 ENSP00000365024
ENST00000409525 ENSP00000386365
ENST00000471088
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 7 experimentally validated interaction(s) in this database.
Experimentally validated
Total 7 [view]
Protein-Protein 7 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0003674 molecular_function
Biological Process
GO:0008150 biological_process
Cellular Component
GO:0005575 cellular_component
GO:0005576 extracellular region
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000043807
View Gene Order
ENSBTAG00000039740
Not yet available
Cross-References
SwissProt Q8NDX9
TrEMBL A0A024RCN3 N0E641
UniProt Splice Variant
Entrez Gene 58496
UniGene Hs.708719
RefSeq NM_021221
HUGO HGNC:13931
OMIM 610433
CCDS CCDS34400
HPRD
IMGT
EMBL AF129756 AJ245417 AJ315545 AK289364 AL662899 AL670886 AL805934 BA000025 BX511262 CH471081 CR354443 CR753842 CR759761 HE864450
GenPept AAF04397 BAB63385 BAF82053 CAB52191 CAC85543 CAI17803 CAI18396 CAI18526 CAM45828 CAQ06575 CAQ07005 CAQ10882 CAX15050 CCI79687 EAX03476 EAX03477
RNA Seq Atlas 58496

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca