Version 5.4
Homo sapiens Gene: SLC39A13
Summary
InnateDB Gene IDBG-43334.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol SLC39A13
Gene Name solute carrier family 39 (zinc transporter), member 13
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000165915
Encoded Proteins
IDBP-43336
solute carrier family 39 (zinc transporter), member 13
IDBP-43338
solute carrier family 39 (zinc transporter), member 13
IDBP-595838
solute carrier family 39 (zinc transporter), member 13
IDBP-587216
solute carrier family 39 (zinc transporter), member 13
IDBP-597857
solute carrier family 39 (zinc transporter), member 13
IDBP-595054
solute carrier family 39 (zinc transporter), member 13
IDBP-595518
solute carrier family 39 (zinc transporter), member 13
IDBP-591474
solute carrier family 39 (zinc transporter), member 13
IDBP-599622
solute carrier family 39 (zinc transporter), member 13
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene encodes a member of the LIV-1 subfamily of the ZIP transporter family. The encoded transmembrane protein functions as a zinc transporter. Mutations in this gene have been associated with the spondylocheiro dysplastic form of Ehlers-Danlos syndrome.[provided by RefSeq, Mar 2010]
Gene Information
Type Protein coding
Genomic Location Chromosome 11:47407132-47416501
Strand Forward strand
Band p11.2
Transcripts
ENST00000354884 ENSP00000346956
ENST00000362021 ENSP00000354689
ENST00000533076 ENSP00000434290
ENST00000531974 ENSP00000435845
ENST00000531419 ENSP00000432302
ENST00000531865 ENSP00000434684
ENST00000526614 ENSP00000432499
ENST00000527091 ENSP00000435076
ENST00000524928 ENSP00000437186
ENST00000529740
ENST00000528979
ENST00000527829
ENST00000524886
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
Gene Ontology

Molecular Function
Accession GO Term
GO:0005385 zinc ion transmembrane transporter activity
GO:0042803 protein homodimerization activity
GO:0046873 metal ion transmembrane transporter activity
Biological Process
GO:0006882 cellular zinc ion homeostasis
GO:0030001 metal ion transport
GO:0055085 transmembrane transport
GO:0061448 connective tissue development
GO:0071577 zinc ion transmembrane transport
Cellular Component
GO:0005794 Golgi apparatus
GO:0016020 membrane
GO:0016021 integral component of membrane
GO:0030173 integral component of Golgi membrane
GO:0048471 perinuclear region of cytoplasm
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000002105
View Gene Order
ENSBTAG00000019436
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.523664
RefSeq NM_001128225 NM_152264 XM_005253221 XM_006718381 XM_006718382 XM_006718384
HUGO
OMIM
CCDS CCDS44592 CCDS7934
HPRD
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca