Version 5.4
Homo sapiens Gene: HNRNPUL1
Summary
InnateDB Gene IDBG-52711.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol HNRNPUL1
Gene Name heterogeneous nuclear ribonucleoprotein U-like 1
Synonyms E1B-AP5; E1BAP5; HNRPUL1
Species Homo sapiens
Ensembl Gene ENSG00000105323
Encoded Proteins
IDBP-52713
heterogeneous nuclear ribonucleoprotein U-like 1
IDBP-52715
heterogeneous nuclear ribonucleoprotein U-like 1
IDBP-52717
heterogeneous nuclear ribonucleoprotein U-like 1
IDBP-246534
heterogeneous nuclear ribonucleoprotein U-like 1
IDBP-765889
IDBP-762034
IDBP-763269
IDBP-765477
IDBP-761852
IDBP-764308
IDBP-759765
IDBP-765356
IDBP-759871
IDBP-762052
IDBP-761664
IDBP-761759
IDBP-809612
heterogeneous nuclear ribonucleoprotein U-like 1
IDBP-809614
heterogeneous nuclear ribonucleoprotein U-like 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene encodes a nuclear RNA-binding protein of the heterogeneous nuclear ribonucleoprotein (hnRNP) family. This protein binds specifically to adenovirus E1B-55kDa oncoprotein. It may play an important role in nucleocytoplasmic RNA transport, and its function is modulated by E1B-55kDa in adenovirus-infected cells. Two transcript variants encoding different isoforms have been found for this gene. Additional variants have also been found, but their full-length natures have not been determined. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 19:41262496-41307598
Strand Forward strand
Band q13.2
Transcripts
ENST00000352456 ENSP00000340857
ENST00000263367 ENSP00000263367
ENST00000378215 ENSP00000367460
ENST00000392006 ENSP00000375863
ENST00000600493
ENST00000599719 ENSP00000470172
ENST00000600596 ENSP00000469934
ENST00000593587 ENSP00000472629
ENST00000599521
ENST00000595336 ENSP00000472221
ENST00000601336 ENSP00000471302
ENST00000599614 ENSP00000473178
ENST00000602130 ENSP00000470687
ENST00000595196 ENSP00000472315
ENST00000595018 ENSP00000473132
ENST00000594207
ENST00000595806
ENST00000601309 ENSP00000470793
ENST00000600332 ENSP00000469816
ENST00000597725 ENSP00000469858
ENST00000617305 ENSP00000484226
ENST00000617774 ENSP00000478946
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 123 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Experimentally validated
Total 123 [view]
Protein-Protein 120 [view]
Protein-DNA 3 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003676 nucleic acid binding
GO:0003723 RNA binding
GO:0005515 protein binding
GO:0019899 enzyme binding
GO:0044822 poly(A) RNA binding
Biological Process
GO:0000398 mRNA splicing, via spliceosome
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
GO:0006396 RNA processing
GO:0008380 RNA splicing
GO:0009615 response to virus
GO:0010467 gene expression
Cellular Component
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0019013 viral nucleocapsid
GO:0030529 ribonucleoprotein complex
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000040725
View Gene Order
ENSBTAG00000003168
Not yet available
Pathways
NETPATH
REACTOME
REACT_467
mRNA Splicing - Major Pathway pathway
REACT_125
Processing of Capped Intron-Containing Pre-mRNA pathway
REACT_1735
mRNA Splicing pathway
REACT_71
Gene Expression pathway
KEGG
INOH
PID NCI
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene 11100
UniGene
RefSeq NM_007040 NM_144732 XM_005258459 XM_005258461 XM_005258463 XM_005258464 XM_005258465
HUGO HGNC:17011
OMIM 605800
CCDS CCDS12576 CCDS12577
HPRD
IMGT
EMBL
GenPept
RNA Seq Atlas 11100

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca