Version 5.4
Homo sapiens Gene: FAM161A
Summary
InnateDB Gene IDBG-53408.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol FAM161A
Gene Name family with sequence similarity 161, member A
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000170264
Encoded Proteins
IDBP-53410
family with sequence similarity 161, member A
IDBP-293099
family with sequence similarity 161, member A
IDBP-293094
family with sequence similarity 161, member A
IDBP-377433
family with sequence similarity 161, member A
IDBP-377441
family with sequence similarity 161, member A
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene belongs to the FAM161 family. It is expressed mainly in the retina. Mouse studies suggested that this gene is involved in development of retinal progenitors during embryogenesis, and that its activity is restricted to mature photoreceptors after birth. Mutations in this gene cause autosomal recessive retinitis pigmentosa-28. Alternatively spliced transcript variants have been identified.[provided by RefSeq, Jan 2011]
Gene Information
Type Protein coding
Genomic Location Chromosome 2:61824854-61854143
Strand Reverse strand
Band p15
Transcripts
ENST00000307507 ENSP00000303170
ENST00000405894 ENSP00000385893
ENST00000404929 ENSP00000385158
ENST00000456262 ENSP00000396105
ENST00000418113 ENSP00000416861
ENST00000478494
ENST00000496369
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
Experimentally validated
Total 1 [view]
Protein-Protein 1 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
Biological Process
GO:0007601 visual perception
GO:0042384 cilium assembly
GO:0050896 response to stimulus
Cellular Component
GO:0005737 cytoplasm
GO:0005813 centrosome
GO:0032391 photoreceptor connecting cilium
GO:0036064 ciliary basal body
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000049811
View Gene Order
ENSBTAG00000009290
Not yet available
Cross-References
SwissProt Q3B820
TrEMBL F8W731 F8WCZ8
UniProt Splice Variant
Entrez Gene 84140
UniGene Hs.440466
RefSeq NM_001201543 NM_032180 XM_006712113 XM_006712114
HUGO HGNC:25808
OMIM 613596
CCDS CCDS42687 CCDS56120
HPRD
IMGT
EMBL AC107081 AK023367 AK296255 BC107162 BC107163 BX648834 BX649029
GenPept BAB14544 BAG58969
RNA Seq Atlas 84140

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca