Version 5.4
Homo sapiens Gene: SNRPG
Summary
InnateDB Gene IDBG-55288.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol SNRPG
Gene Name small nuclear ribonucleoprotein polypeptide G
Synonyms Sm-G; SMG
Species Homo sapiens
Ensembl Gene ENSG00000143977
Encoded Proteins
IDBP-55290
small nuclear ribonucleoprotein polypeptide G
IDBP-378601
small nuclear ribonucleoprotein polypeptide G
IDBP-378604
small nuclear ribonucleoprotein polypeptide G
IDBP-378606
small nuclear ribonucleoprotein polypeptide G
IDBP-378610
small nuclear ribonucleoprotein polypeptide G
IDBP-597221
small nuclear ribonucleoprotein polypeptide G
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 2:70281362-70293771
Strand Reverse strand
Band p13.3
Transcripts
ENST00000272348 ENSP00000272348
ENST00000429728
ENST00000438261 ENSP00000402194
ENST00000454893 ENSP00000393388
ENST00000413456 ENSP00000416334
ENST00000449935 ENSP00000391403
ENST00000482975 ENSP00000441332
ENST00000480370
ENST00000488400
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 50 experimentally validated interaction(s) in this database.
Experimentally validated
Total 50 [view]
Protein-Protein 49 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 1 [view]
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0044822 poly(A) RNA binding
Biological Process
GO:0000245 spliceosomal complex assembly
GO:0000387 spliceosomal snRNP assembly
GO:0000398 mRNA splicing, via spliceosome
GO:0006366 transcription from RNA polymerase II promoter
GO:0006369 termination of RNA polymerase II transcription
GO:0008334 histone mRNA metabolic process
GO:0008380 RNA splicing
GO:0010467 gene expression
GO:0016070 RNA metabolic process
GO:0031124 mRNA 3'-end processing
GO:0034660 ncRNA metabolic process
Cellular Component
GO:0005654 nucleoplasm
GO:0005681 spliceosomal complex
GO:0005683 U7 snRNP
GO:0005685 U1 snRNP
GO:0005687 U4 snRNP
GO:0005689 U12-type spliceosomal complex
GO:0005829 cytosol
GO:0030532 small nuclear ribonucleoprotein complex
GO:0034709 methylosome
GO:0034719 SMN-Sm protein complex
GO:0071013 catalytic step 2 spliceosome
Orthologs
No orthologs found for this gene
Pathways
NETPATH
REACTOME
REACT_11066
snRNP Assembly pathway
REACT_185
SLBP independent Processing of Histone Pre-mRNAs pathway
REACT_1364
SLBP Dependent Processing of Replication-Dependent Histone Pre-mRNAs pathway
REACT_467
mRNA Splicing - Major Pathway pathway
REACT_1753
mRNA Splicing - Minor Pathway pathway
REACT_125
Processing of Capped Intron-Containing Pre-mRNA pathway
REACT_387
Cleavage of Growing Transcript in the Termination Region pathway
REACT_894
RNA Polymerase II Transcription Termination pathway
REACT_1366
RNA Polymerase II Transcription pathway
REACT_11052
Metabolism of non-coding RNA pathway
REACT_1768
Processing of Capped Intronless Pre-mRNA pathway
REACT_1735
mRNA Splicing pathway
REACT_71
Gene Expression pathway
KEGG
hsa03040
Spliceosome pathway
INOH
PID NCI
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene
RefSeq NM_003096
HUGO
OMIM
CCDS CCDS1903
HPRD 04646
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca