Version 5.4
Homo sapiens Gene: PRPF39
Summary
InnateDB Gene IDBG-5531.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol PRPF39
Gene Name PRP39 pre-mRNA processing factor 39 homolog (S. cerevisiae)
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000185246
Encoded Proteins
IDBP-5533
PRP39 pre-mRNA processing factor 39 homolog (S. cerevisiae)
IDBP-367226
PRP39 pre-mRNA processing factor 39 homolog (S. cerevisiae)
IDBP-600660
PRP39 pre-mRNA processing factor 39 homolog (S. cerevisiae)
IDBP-592669
PRP39 pre-mRNA processing factor 39 homolog (S. cerevisiae)
IDBP-600366
PRP39 pre-mRNA processing factor 39 homolog (S. cerevisiae)
IDBP-599498
PRP39 pre-mRNA processing factor 39 homolog (S. cerevisiae)
IDBP-583472
PRP39 pre-mRNA processing factor 39 homolog (S. cerevisiae)
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 14:45084099-45116282
Strand Forward strand
Band q21.2
Transcripts
ENST00000355765 ENSP00000348010
ENST00000424478 ENSP00000390867
ENST00000477626
ENST00000553605 ENSP00000452428
ENST00000556782
ENST00000554439 ENSP00000451334
ENST00000554429 ENSP00000451331
ENST00000556353
ENST00000554081 ENSP00000451988
ENST00000557477 ENSP00000452516
ENST00000554785
ENST00000556718
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 9 experimentally validated interaction(s) in this database.
Experimentally validated
Total 9 [view]
Protein-Protein 9 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
Biological Process
GO:0006396 RNA processing
GO:0006397 mRNA processing
GO:0008380 RNA splicing
Cellular Component
GO:0005622 intracellular
GO:0005634 nucleus
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000035597
View Gene Order
ENSBTAG00000002603
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.274337 Hs.642460
RefSeq NM_017922
HUGO
OMIM
CCDS CCDS9682
HPRD 17913
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca