Version 5.4
Homo sapiens Gene: SLC6A16
Summary
InnateDB Gene IDBG-62468.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol SLC6A16
Gene Name solute carrier family 6, member 16
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000063127
Encoded Proteins
IDBP-62470
solute carrier family 6, member 16
IDBP-383167
solute carrier family 6, member 16
IDBP-762598
IDBP-766272
IDBP-762924
IDBP-764484
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary SLC6A16 shows structural characteristics of an Na(+)- and Cl(-)-dependent neurotransmitter transporter, including 12 transmembrane (TM) domains, intracellular N and C termini, and large extracellular loops containing multiple N-glycosylation sites.[supplied by OMIM, Mar 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 19:49289638-49325225
Strand Reverse strand
Band q13.33
Transcripts
ENST00000335875 ENSP00000338627
ENST00000454748 ENSP00000404022
ENST00000598221
ENST00000597969 ENSP00000472752
ENST00000594180 ENSP00000470623
ENST00000598828 ENSP00000469885
ENST00000594917 ENSP00000472191
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
Gene Ontology

Molecular Function
Accession GO Term
GO:0005326 neurotransmitter transporter activity
GO:0005328 neurotransmitter:sodium symporter activity
Biological Process
GO:0006836 neurotransmitter transport
GO:0055085 transmembrane transport
Cellular Component
GO:0005622 intracellular
GO:0016021 integral component of membrane
Orthologs
Species
Mus musculus
Gene ID
Gene Order
ENSMUSG00000094152
View Gene Order
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.130949 Hs.597776
RefSeq NM_014037 XM_005258819 XM_005258820 XM_006723168
HUGO
OMIM
CCDS CCDS42590
HPRD
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca