Version 5.4
Homo sapiens Gene: CNTNAP3
Summary
InnateDB Gene IDBG-66391.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol CNTNAP3
Gene Name contactin associated protein-like 3
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000106714
Encoded Proteins
IDBP-66393
contactin associated protein-like 3
IDBP-66395
contactin associated protein-like 3
IDBP-66399
contactin associated protein-like 3
IDBP-66401
contactin associated protein-like 3
IDBP-583601
contactin associated protein-like 3
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary The protein encoded by this gene belongs to the NCP family of cell-recognition molecules. This family represents a distinct subgroup of the neurexins. NCP proteins mediate neuron-glial interactions in vertebrates and glial-glial contact in invertebrates. The protein encoded by this gene may play a role in cell recognition within the nervous system. Alternatively spliced transcript variants encoding different isoforms have been described but their biological nature has not been determined. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 9:39072767-39288315
Strand Reverse strand
Band p12
Transcripts
ENST00000297668 ENSP00000297668
ENST00000358144 ENSP00000350863
ENST00000377659 ENSP00000366887
ENST00000377656 ENSP00000366884
ENST00000377653
ENST00000443583 ENSP00000432863
ENST00000448573
ENST00000493965
ENST00000477002
ENST00000483502
ENST00000495573
ENST00000469061
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 2 experimentally validated interaction(s) in this database.
Experimentally validated
Total 2 [view]
Protein-Protein 2 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
Biological Process
GO:0007155 cell adhesion
GO:0008037 cell recognition
Cellular Component
GO:0005576 extracellular region
GO:0005886 plasma membrane
GO:0016021 integral component of membrane
Orthologs
Species
Mus musculus
Gene ID
Gene Order
ENSMUSG00000033063
View Gene Order
Cross-References
SwissProt
TrEMBL A6NC89 B1AM99
UniProt Splice Variant
Entrez Gene 79937
UniGene Hs.571598 Hs.632661
RefSeq NM_033655 XM_005251586 XM_006716871 XM_006716876
HUGO HGNC:13834
OMIM 610517
CCDS CCDS6616
HPRD 10842
IMGT
EMBL AL162501 AL353729
GenPept
RNA Seq Atlas 79937

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca