Version 5.4
Homo sapiens Gene: RPE
Summary
InnateDB Gene IDBG-79853.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol RPE
Gene Name ribulose-5-phosphate-3-epimerase
Synonyms RPE2-1
Species Homo sapiens
Ensembl Gene ENSG00000197713
Encoded Proteins
IDBP-79855
ribulose-5-phosphate-3-epimerase
IDBP-79857
ribulose-5-phosphate-3-epimerase
IDBP-293104
ribulose-5-phosphate-3-epimerase
IDBP-388672
ribulose-5-phosphate-3-epimerase
IDBP-388673
ribulose-5-phosphate-3-epimerase
IDBP-388674
ribulose-5-phosphate-3-epimerase
IDBP-388675
ribulose-5-phosphate-3-epimerase
IDBP-388678
ribulose-5-phosphate-3-epimerase
IDBP-388679
ribulose-5-phosphate-3-epimerase
IDBP-388680
ribulose-5-phosphate-3-epimerase
IDBP-388681
ribulose-5-phosphate-3-epimerase
IDBP-388683
ribulose-5-phosphate-3-epimerase
IDBP-388684
ribulose-5-phosphate-3-epimerase
IDBP-388685
ribulose-5-phosphate-3-epimerase
IDBP-388687
ribulose-5-phosphate-3-epimerase
IDBP-388689
ribulose-5-phosphate-3-epimerase
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 2:210002565-210022259
Strand Forward strand
Band q34
Transcripts
ENST00000359429 ENSP00000352401
ENST00000354506 ENSP00000346501
ENST00000408981 ENSP00000386194
ENST00000429921 ENSP00000401838
ENST00000454822 ENSP00000394455
ENST00000453724 ENSP00000412245
ENST00000438265 ENSP00000397674
ENST00000429907 ENSP00000392279
ENST00000438204 ENSP00000402061
ENST00000452025 ENSP00000400449
ENST00000445268 ENSP00000405695
ENST00000441588 ENSP00000416805
ENST00000438191 ENSP00000411405
ENST00000411934 ENSP00000389411
ENST00000436630 ENSP00000403808
ENST00000435437 ENSP00000411186
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 4 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Experimentally validated
Total 4 [view]
Protein-Protein 4 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003824 catalytic activity
GO:0004750 ribulose-phosphate 3-epimerase activity
GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives
GO:0042802 identical protein binding
GO:0042803 protein homodimerization activity
GO:0046872 metal ion binding
Biological Process
GO:0005975 carbohydrate metabolic process
GO:0006098 pentose-phosphate shunt
GO:0008152 metabolic process
GO:0044281 small molecule metabolic process
Cellular Component
GO:0005829 cytosol
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000026005
View Gene Order
ENSBTAG00000047806
Not yet available
Pathways
NETPATH
REACTOME
REACT_1859
Pentose phosphate pathway (hexose monophosphate shunt) pathway
REACT_200783
Myoclonic epilepsy of Lafora pathway
REACT_474
Metabolism of carbohydrates pathway
REACT_111217
Metabolism pathway
REACT_116125
Disease pathway
REACT_200833
Glycogen storage diseases pathway
KEGG
hsa00030
Pentose phosphate pathway pathway
hsa00040
Pentose and glucuronate interconversions pathway
INOH
PID NCI
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.282260 Hs.724245
RefSeq NM_001278282 NM_001278283 NM_001278285 NM_001278286 NM_001278288 NM_001278289 NM_006916 NM_199229
HUGO
OMIM
CCDS CCDS2388 CCDS42810 CCDS63107 CCDS63108
HPRD 01608
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca