Version 5.4
Homo sapiens Gene: PHF19
Summary
InnateDB Gene IDBG-83105.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol PHF19
Gene Name PHD finger protein 19
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000119403
Encoded Proteins
IDBP-83107
PHD finger protein 19
IDBP-83111
PHD finger protein 19
IDBP-379207
PHD finger protein 19
IDBP-379208
PHD finger protein 19
IDBP-379211
PHD finger protein 19
IDBP-379214
PHD finger protein 19
IDBP-379217
PHD finger protein 19
IDBP-809722
PHD finger protein 19
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 9:120855652-120894896
Strand Reverse strand
Band q33.2
Transcripts
ENST00000373896 ENSP00000363003
ENST00000312189 ENSP00000310372
ENST00000419155 ENSP00000407433
ENST00000453868 ENSP00000395938
ENST00000439674 ENSP00000404655
ENST00000436309 ENSP00000408479
ENST00000456291 ENSP00000397935
ENST00000487555
ENST00000462229
ENST00000464712
ENST00000467266
ENST00000474402
ENST00000478371
ENST00000616568 ENSP00000483946
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 13 experimentally validated interaction(s) in this database.
Experimentally validated
Total 13 [view]
Protein-Protein 12 [view]
Protein-DNA 1 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0008270 zinc ion binding
GO:0035064 methylated histone binding
Biological Process
GO:0000122 negative regulation of transcription from RNA polymerase II promoter
GO:0006351 transcription, DNA-templated
GO:0016568 chromatin modification
GO:0019827 stem cell maintenance
GO:0048863 stem cell differentiation
GO:0061087 positive regulation of histone H3-K27 methylation
Cellular Component
GO:0035098 ESC/E(Z) complex
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000026873
View Gene Order
ENSBTAG00000016958
Not yet available
Pathways
NETPATH
REACTOME
REACT_200808
PRC2 methylates histones and DNA pathway
REACT_200857
Epigenetic regulation of gene expression pathway
REACT_71
Gene Expression pathway
KEGG
INOH
PID NCI
Cross-References
SwissProt Q5T6S3
TrEMBL B0QZ50 B0QZ51 B0QZ72 F5H8K3 X6RER8
UniProt Splice Variant
Entrez Gene 26147
UniGene Hs.460124
RefSeq NM_001009936 NM_001286840 NM_001286842 NM_001286843 NM_015651 XM_005251906 XM_006717045 XM_006717046 XM_006717048
HUGO HGNC:24566
OMIM 609740
CCDS CCDS35116 CCDS35117 CCDS69648 CCDS75889
HPRD
IMGT
EMBL AL117477 AL161911 AL354792 BC022374 BC108663 BC125076 BC125077 BX640713
GenPept AAH22374 AAI08664 AAI25077 AAI25078 CAB55950 CAE45832 CAI15690 CAI15691 CAI15692 CAI95112
RNA Seq Atlas 26147

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca