Version 5.4
Homo sapiens Gene: RC3H2
Summary
InnateDB Gene IDBG-84229.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol RC3H2
Gene Name ring finger and CCCH-type domains 2
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000056586
Encoded Proteins
IDBP-84231
ring finger and CCCH-type domains 2
IDBP-84233
ring finger and CCCH-type domains 2
IDBP-84241
ring finger and CCCH-type domains 2
IDBP-232426
ring finger and CCCH-type domains 2
IDBP-379745
ring finger and CCCH-type domains 2
IDBP-379760
ring finger and CCCH-type domains 2
IDBP-813011
ring finger and CCCH-type domains 2
IDBP-813019
ring finger and CCCH-type domains 2
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 9:122844556-122905341
Strand Reverse strand
Band q33.2
Transcripts
ENST00000373670 ENSP00000362774
ENST00000357244 ENSP00000349783
ENST00000335387 ENSP00000335150
ENST00000398671 ENSP00000381663
ENST00000454740 ENSP00000398081
ENST00000423239 ENSP00000411767
ENST00000498479 ENSP00000474709
ENST00000495727
ENST00000478216
ENST00000471874 ENSP00000474148
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 7 experimentally validated interaction(s) in this database.
Experimentally validated
Total 7 [view]
Protein-Protein 7 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0003677 DNA binding
GO:0003729 mRNA binding
GO:0004842 ubiquitin-protein transferase activity
GO:0005515 protein binding
GO:0008270 zinc ion binding
GO:0044822 poly(A) RNA binding
GO:0046872 metal ion binding
Biological Process
GO:0000209 protein polyubiquitination
GO:0001782 B cell homeostasis
GO:0009791 post-embryonic development
GO:0010468 regulation of gene expression
GO:0010608 posttranscriptional regulation of gene expression
GO:0035264 multicellular organism growth
GO:0042098 T cell proliferation
GO:0043029 T cell homeostasis
GO:0048286 lung alveolus development
GO:0048535 lymph node development
GO:0048536 spleen development
GO:0060173 limb development
GO:0061470 T follicular helper cell differentiation
GO:1901224 positive regulation of NIK/NF-kappaB signaling
Cellular Component
GO:0000932 cytoplasmic mRNA processing body
GO:0005634 nucleus
GO:0005737 cytoplasm
GO:0009986 cell surface
GO:0016020 membrane
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000075376
View Gene Order
ENSBTAG00000023867
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene 54542
UniGene Hs.533499 Hs.600302 Hs.709775 Hs.717690
RefSeq NM_001100588 NM_018835
HUGO HGNC:21461
OMIM 615231
CCDS CCDS43874 CCDS48014
HPRD 14726
IMGT
EMBL
GenPept
RNA Seq Atlas 54542

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca