Version 5.4
Homo sapiens Gene: BARHL1
Summary
InnateDB Gene IDBG-90296.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol BARHL1
Gene Name BarH-like homeobox 1
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000125492
Encoded Proteins
IDBP-90298
BarH-like homeobox 1
IDBP-585743
BarH-like homeobox 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 9:132582185-132590266
Strand Forward strand
Band q34.13
Transcripts
ENST00000263610 ENSP00000263610
ENST00000542090 ENSP00000444704
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 3 experimentally validated interaction(s) in this database.
They are also associated with 2 interaction(s) predicted by orthology.
Experimentally validated
Total 3 [view]
Protein-Protein 3 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 2 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0001077 RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0003677 DNA binding
GO:0043565 sequence-specific DNA binding
Biological Process
GO:0001764 neuron migration
GO:0006351 transcription, DNA-templated
GO:0007605 sensory perception of sound
GO:0030901 midbrain development
GO:0043524 negative regulation of neuron apoptotic process
GO:0045944 positive regulation of transcription from RNA polymerase II promoter
Cellular Component
GO:0005634 nucleus
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000026805
View Gene Order
ENSBTAG00000023801
Not yet available
Cross-References
SwissProt Q9BZE3
TrEMBL
UniProt Splice Variant
Entrez Gene 56751
UniGene Hs.283809
RefSeq NM_020064
HUGO HGNC:953
OMIM 605211
CCDS CCDS6950
HPRD 05554
IMGT
EMBL AF321618 AF325688 AJ237816 AK054797 AL354735 BC136956 BC136969 CH471090
GenPept AAG50279 AAI36957 AAI36970 AAK52674 BAB70807 CAB92439 CAI16566 EAW88005
RNA Seq Atlas 56751

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca