Homo sapiens Gene: NBPF3
Summary
InnateDB Gene IDBG-93149.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol NBPF3
Gene Name neuroblastoma breakpoint family, member 3
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000142794
Encoded Proteins
neuroblastoma breakpoint family, member 3
neuroblastoma breakpoint family, member 3
neuroblastoma breakpoint family, member 3
neuroblastoma breakpoint family, member 3
neuroblastoma breakpoint family, member 3
neuroblastoma breakpoint family, member 3
neuroblastoma breakpoint family, member 3
neuroblastoma breakpoint family, member 3
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene is a member of the neuroblastoma breakpoint family (NBPF) which consists of dozens of recently duplicated genes primarily located in segmental duplications on human chromosome 1. This gene family has experienced its greatest expansion within the human lineage and has expanded, to a lesser extent, among primates in general. Members of this gene family are characterized by tandemly repeated copies of DUF1220 protein domains. DUF1220 copy number variations in human chromosomal region 1q21.1, where most DUF1220 domains are located, have been implicated in a number of developmental and neurogenetic diseases such as microcephaly, macrocephaly, autism, schizophrenia, mental retardation, congenital heart disease, neuroblastoma, and congenital kidney and urinary tract anomalies. Altered expression of some gene family members is associated with several types of cancer. This gene family contains numerous pseudogenes. [provided by RefSeq, Feb 2013]
Gene Information
Type Protein coding
Genomic Location Chromosome 1:21440128-21485005
Strand Forward strand
Band p36.12
Transcripts
ENST00000318220 ENSP00000316739
ENST00000318249 ENSP00000316782
ENST00000342104 ENSP00000340336
ENST00000434838 ENSP00000391865
ENST00000454000 ENSP00000415711
ENST00000475869
ENST00000478653
ENST00000485941
ENST00000486229 ENSP00000478530
ENST00000467103 ENSP00000479028
ENST00000469876
ENST00000477050
ENST00000619554 ENSP00000484028
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 7 experimentally validated interaction(s) in this database.
Experimentally validated
Total 7 [view]
Protein-Protein 6 [view]
Protein-DNA 1 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
Biological Process
Cellular Component
GO:0005737 cytoplasm
Orthologs
No orthologs found for this gene
Cross-References
SwissProt Q9H094
TrEMBL X6RCV0
UniProt Splice Variant
Entrez Gene 84224
UniGene Hs.325422 Hs.733254 Hs.735164
RefSeq NM_032264 NM_001256416 NM_001256417
HUGO HGNC:25076
OMIM 612992
CCDS CCDS216 CCDS57976 CCDS57977
HPRD 10633
IMGT
EMBL AF379629 AK292580 AK299840 AL136890 AL592309 AL834330 AY598326 AY894564 BC024011
GenPept AAH24011 AAO15397 AAT06737 AAX85103 BAF85269 BAG61704 CAB66824 CAD38998 CAH72075 CAH72077 CAH72078
RNA Seq Atlas 84224