Version 5.4
Homo sapiens Gene: TRAPPC3
Summary
InnateDB Gene IDBG-96305.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol TRAPPC3
Gene Name trafficking protein particle complex 3
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000054116
Encoded Proteins
IDBP-96307
trafficking protein particle complex 3
IDBP-96309
trafficking protein particle complex 3
IDBP-96311
trafficking protein particle complex 3
IDBP-96313
trafficking protein particle complex 3
IDBP-806521
trafficking protein particle complex 3
IDBP-806523
trafficking protein particle complex 3
IDBP-806525
trafficking protein particle complex 3
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene encodes a component of the trafficking protein particle complex, which tethers transport vesicles to the cis-Golgi membrane. The encoded protein participates in the regulation of transport from the endoplasmic reticulum to the Golgi apparatus. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Aug 2012]
Gene Information
Type Protein coding
Genomic Location Chromosome 1:36136570-36156053
Strand Reverse strand
Band p34.3
Transcripts
ENST00000373166 ENSP00000362261
ENST00000373163 ENSP00000362257
ENST00000373162 ENSP00000362256
ENST00000373159 ENSP00000362253
ENST00000462715
ENST00000469757
ENST00000497251
ENST00000617904 ENSP00000480648
ENST00000616074 ENSP00000482052
ENST00000616395 ENSP00000480332
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 35 experimentally validated interaction(s) in this database.
They are also associated with 3 interaction(s) predicted by orthology.
Experimentally validated
Total 35 [view]
Protein-Protein 34 [view]
Protein-DNA 1 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 3 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
Biological Process
GO:0006888 ER to Golgi vesicle-mediated transport
Cellular Component
GO:0000139 Golgi membrane
GO:0005783 endoplasmic reticulum
GO:0005829 cytosol
GO:0030008 TRAPP complex
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000028847
View Gene Order
ENSBTAG00000005732
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.523131
RefSeq NM_001270894 NM_001270895 NM_001270896 NM_001270897 NM_014408
HUGO
OMIM
CCDS CCDS404 CCDS59194 CCDS72757 CCDS72758
HPRD 11644
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca