Version 5.4
Mus musculus Gene: Gatad1
Summary
InnateDB Gene IDBG-131741.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Gatad1
Gene Name GATA zinc finger domain containing 1
Synonyms 2310031E19Rik; 2810047M21Rik; 8430439A17Rik; 9130430G15Rik; B330017N08Rik; ENSMUSG00000073241; Odag
Species Mus musculus
Ensembl Gene ENSMUSG00000007415
Encoded Proteins
IDBP-131743
GATA zinc finger domain containing 1
IDBP-401596
GATA zinc finger domain containing 1
IDBP-541803
GATA zinc finger domain containing 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000157259:
The protein encoded by this gene contains a zinc finger at the N-terminus, and is thought to bind to a histone modification site that regulates gene expression. Mutations in this gene have been associated with autosomal recessive dilated cardiomyopathy. Alternatively spliced transcript variants have been found for this gene. [provided by RefSeq, Jun 2012]
Gene Information
Type Protein coding
Genomic Location Chromosome 5:3632932-3647934
Strand Reverse strand
Band A1
Transcripts
ENSMUST00000007559 ENSMUSP00000007559
ENSMUST00000119783 ENSMUSP00000113271
ENSMUST00000140871 ENSMUSP00000122092
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
They are also associated with 4 interaction(s) predicted by orthology.
Experimentally validated
Total 1 [view]
Protein-Protein 1 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 4 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003700 sequence-specific DNA binding transcription factor activity
GO:0008270 zinc ion binding
GO:0043565 sequence-specific DNA binding
Biological Process
GO:0006355 regulation of transcription, DNA-templated
Cellular Component
GO:0005634 nucleus
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000157259
View Gene Order
ENSBTAG00000021996
Not yet available
Cross-References
SwissProt
TrEMBL F7CAN4
UniProt Splice Variant
Entrez Gene 67210
UniGene Mm.178424 Mm.418577 Mm.441974
RefSeq NM_026033
OMIM
CCDS CCDS19066
HPRD
IMGT
MGI ID MGI:1914460
MGI Symbol Gatad1
EMBL AC090443
GenPept
RNA Seq Atlas 67210

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca